Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod01g2522 | ATGGCATTGAACCAAAACCACTCTTACAAGCTTGAATATCACACACCACAACCTGATTCAGACCCTTCTTTACTCATATTTGCCATTGTTGTGCCCATCATATTGGCCACAGTTTTCATACTTATCATTACCAAATGCTGCTCAAACTGGCATCAACTTAACCCACTGAGATGGATTTCCATCCTAAGAGCTCCACAGAATGAAGACCCCTTCATAGCATTCTCTCCAAGGATGTGGAACTTTGGCCTTGATGAATCTGCGATCCAAGAAATCCCAGCATTGCAATTCACAAAAGGAGGAGGAGGTGGTGAGGACCAAAACGTCTATAGCTGTGTGGTTTGTTTGACTGAGTTTCAAGAACAGGATATGCTAAAAGTTCTGCCAAATTGCAGCCATGCATTTCACTTGGATTGCATTGATATTTGGCTTCAAACCAATGCAAATTGCCCTCTTTGTAGATCAAGCATTGCTGGCAACAGACAATGCCCAATGGACCATATCATAGCACCAAGCTCTTCTCCTCAGGACTCTCAACTGCTCTCGAACATGGGCAGTGATGAAGATTTTGTGGTCATTGACCTTGGGGGAGAACATGGGGGAACACTGCCACAGATGCAGCAAGAAGTGAATGACTCAAGGGAAAGCCTAGCACATAGTAGTAGTCACTCTACAAGGAAGATGGTGCAGTTGAAACCAAGGAAGTGCCACCATGTTTCCATCATGGGAGATGAATGCATTGATGTTAGAAAGAAAGATGACCGGTTTTCTTCTATTCAGCCTATCAGAAGATCTTTCTCAATGGACTCTGCTAATGACAGACAGGTTTACTTGGATGTTCAAGCCATCATACAACAAAATAGGCATCAAAATGAGGCCAGTGGTAGTGAAGATTGTAATAGCAGAAATCGAAGATCATTCTTTCCATTTCGTTATGGCCGGGGATCAAAAAGTGCAGTCCTTCCTCTGGAGAACGAGGTTTAA | 981 | 0.4322 | MALNQNHSYKLEYHTPQPDSDPSLLIFAIVVPIILATVFILIITKCCSNWHQLNPLRWISILRAPQNEDPFIAFSPRMWNFGLDESAIQEIPALQFTKGGGGGEDQNVYSCVVCLTEFQEQDMLKVLPNCSHAFHLDCIDIWLQTNANCPLCRSSIAGNRQCPMDHIIAPSSSPQDSQLLSNMGSDEDFVVIDLGGEHGGTLPQMQQEVNDSRESLAHSSSHSTRKMVQLKPRKCHHVSIMGDECIDVRKKDDRFSSIQPIRRSFSMDSANDRQVYLDVQAIIQQNRHQNEASGSEDCNSRNRRSFFPFRYGRGSKSAVLPLENEV* | 327 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod01g2522 | 326 | Pfam | Ring finger domain | 110 | 153 | IPR001841 | - | |
Dod01g2522 | 326 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 6 | 323 | - | - | |
Dod01g2522 | 326 | MobiDBLite | consensus disorder prediction | 209 | 226 | - | - | |
Dod01g2522 | 326 | SUPERFAMILY | RING/U-box | 110 | 157 | - | - | |
Dod01g2522 | 326 | SMART | ring_2 | 111 | 152 | IPR001841 | - | |
Dod01g2522 | 326 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 76 | 164 | IPR013083 | - | |
Dod01g2522 | 326 | ProSiteProfiles | Zinc finger RING-type profile. | 111 | 153 | IPR001841 | - | |
Dod01g2522 | 326 | MobiDBLite | consensus disorder prediction | 209 | 228 | - | - | |
Dod01g2522 | 326 | CDD | RING-H2_PA-TM-RING | 111 | 153 | - | - | |
Dod01g2522 | 326 | PANTHER | RING-H2 FINGER PROTEIN ATL16 | 6 | 323 | IPR044600 | GO:0016567|GO:0016740 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod01g2522 | Dod-Chr1 | 64326321 | 64327552 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod01g2522 | 26 | 289 | C3H Transcription Factor Family | AT1G04360 | 44.781 | 4.56e-70 | 221 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod01g2522 | K19041 | - | gmx:100809883 | 449.129 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod01g2522 | 01 | 64326321 | 64327552 | Dod01g2522 | 01 | 64326321 | 64327552 | ECH | |
Dod01g2522 | 01 | 64326321 | 64327552 | Dod07g0885 | 07 | 13434262 | 13435739 | PCT | |
Dod07g0663 | 07 | 9022305 | 9023315 | Dod01g2522 | 01 | 64326321 | 64327552 | PCT |