Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2517 ATGCCTGCTTGCTTACATGATACAGAGAAAATCATGATAAGTGAAACATTGGATGTTTTAATGCCCGTTCAATGTTCTGGGAACATGTATGCACCTCATTCTGATATTGTGACCAAGCATGAGGGGCCTGAATTTCACAGTGATGAAAGTTCCACTTTGCTTCAATCAATATCCAATATGATGAATGTGAAGCATCAAGAACACAAAGAGGTGAGACCTGTAAATGGGACGCAGCATGAAGGGGGCAGTAGTGCCAACAAAGATGTGATGCTGGAATCAGAAAAAAATGCAACATCACTTTTACATGATACTGTCTTGAATAATGATAGCTTCAATGATTTTATACATGCATCAGACAGAGTCAGAGTTGATTCTGCATCCTTTCCCTCAGTTTTTCTGGATGCAGTTGTTTGTGAAACTGATAAGTTGCATTATGTGGATATTAACCAGAACGGGATGCTGAATTCCACCAGAGCTTCAGATGTAAACTTCCAAAAGCTTGATGAAAAGTCAAAGTTTCTAACTGAGCCTTGTTACAAGGATTCCTCATGCTTTCAAAATGAGAAGGATAACTTGAACACATTGAAGTTCCCTGCTGGCTGCGAGCTACATGAAGCACTTGGGCCAGCCTTTTTTAAAGAGAGTAAATATTTTGATTGGGCAGCGGAGGTGAATCAAGATATGAAAACTATGGATATGCCAGATGATATTAGCTCTAGCCAATTGACGTCCGAGTGTCGTCCAGAGCATCTTTTGGAAGCAATGGTGGCCAACATTTGCCATAGTAATAATGATGTTAATAGTGACTTATCATTTTGTACGTCAATGAAATCTGAAATGGCCTCTGGAAAAAATCACGATGCTTCTATTCGCAATGTGCGTGCCATTAATTCAGAAGGCTGTTCAATAAGTCAGTCTTCTCTTGTCAGAGAGGACAAAAACCATTGTTTTAGTTCATCATCTGGGATGCATGGTGTACTATCCCCCAAAGGATTTTCATCTACATGTCCTAGTTCATATAGTGAACAGTTTGAAAGGTCTTCTGAACCTGCTAAGAACAGCAAGAAGAGGGCTAGGCCAGGGGAAAGTTGTAGGCCTAGGCCAAGGGACAGGCAACTTATCCAAGATCGCATTAAGGAGTTAAGAGAGCTGGTGCCAAATGGAGCAAAGTGCAGCATTGATTCGCTACTGGAGCGTGCAATAAAGCACATGCTCTTTCTCCAGAGCGTAACTAAGCATGCTGACAAGCTAAATAAATTCGCTGATACAAAGTCAAAGTTGCATCACTTGAAAACAGATGCACTTGGATCCTCTAGTTATGAGCAGGGTTCAAGTTTGGCAATGGAGGTTGGGGGCCATCTGAAAGTTCATTCCATATTAGTGGAGAATCTTAGCAAGAATGGACAGATGCTTGTTGAGATGCTGTGTGAAGAGAGCAGCCATTTTCTTGAAATAGCAGAAGCCATAAGAAGCCTAGACCTGACAATTTTGAAGGGTTCAACAAGAGCTCATGGTGAGAAGATATGGATAAGCTTTGTTGTTGAGGGTCAACATAACAGAAATATGCACAGATTGGATATCTTGTGGCCGCTTGTTCAAATACTGCAATCCAAGAGCACTGTGTATTCACTATAG 1635 0.411 MPACLHDTEKIMISETLDVLMPVQCSGNMYAPHSDIVTKHEGPEFHSDESSTLLQSISNMMNVKHQEHKEVRPVNGTQHEGGSSANKDVMLESEKNATSLLHDTVLNNDSFNDFIHASDRVRVDSASFPSVFLDAVVCETDKLHYVDINQNGMLNSTRASDVNFQKLDEKSKFLTEPCYKDSSCFQNEKDNLNTLKFPAGCELHEALGPAFFKESKYFDWAAEVNQDMKTMDMPDDISSSQLTSECRPEHLLEAMVANICHSNNDVNSDLSFCTSMKSEMASGKNHDASIRNVRAINSEGCSISQSSLVREDKNHCFSSSSGMHGVLSPKGFSSTCPSSYSEQFERSSEPAKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERAIKHMLFLQSVTKHADKLNKFADTKSKLHHLKTDALGSSSYEQGSSLAMEVGGHLKVHSILVENLSKNGQMLVEMLCEESSHFLEIAEAIRSLDLTILKGSTRAHGEKIWISFVVEGQHNRNMHRLDILWPLVQILQSKSTVYSL* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2517 544 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 543 - -
Dod01g2517 544 MobiDBLite consensus disorder prediction 348 372 - -
Dod01g2517 544 MobiDBLite consensus disorder prediction 343 372 - -
Dod01g2517 544 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 358 407 IPR011598 GO:0046983
Dod01g2517 544 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 543 IPR043561 GO:0003700|GO:0006355
Dod01g2517 544 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 371 413 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2517 Dod-Chr1 64280550 64283727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2517 59 539 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 42.209 8.96e-92 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2517 - - ccaj:109796613 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2517 01 64280550 64283727 Dod07g0660 07 8989466 8996387 PCT