Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2515 ATGACTGGTTCAGGTTCTCCCTGTGGAGCCTGCAAATTCTTGAGGAGGAAATGTGTCAGAGGCTGTGTCTTTGCACCTCACTTTTGCCATGAGCAGGGTGCCTCCCATTTCGCAGCCATTCACAAGGTCTTTGGTGCAAGCAATGCCTCAAAGCTCCTTGCTCACCTTCCTGTCAGTGACCGCTGTGAAGCTGCAGTCACAATCTCATATGAAGCTCAAGCAAGACTTCAGGACCCAATTTATGGCTGTGTGGCCCATATTTTTGCACTCCAACAGCAGGTGGTCAATTTACAAGCACAGCTAGCTTATCTAAGGGAACAAGCAGCTAAGATCTGTCTAAATCCCTCTGCCACTGAAAACCCTAATGAGGATTACTTTGGAAAACCTAATGTTTTCCCACAGGATCTCCATTATTGGTTCCAGACGGAAAATCCCAACATGGGTCCACAGTTTCTTCCAGACTTATCTAGTTATCCCTCAACGACAGAACACTATGGGATTGGAAATACTAGTCATCACATGGGCCCGAACCCTATTGGAAATTATGGAAGTTCTAGCATCTCGTTCTCTAGTGTTGATGAGAGTGTCTGCAACTCCGTGACCTTTGACGCACAAAGGGAGTGGGCCTTTCATGAAGTGGATGACCTTCAGTAA 654 0.4664 MTGSGSPCGACKFLRRKCVRGCVFAPHFCHEQGASHFAAIHKVFGASNASKLLAHLPVSDRCEAAVTISYEAQARLQDPIYGCVAHIFALQQQVVNLQAQLAYLREQAAKICLNPSATENPNEDYFGKPNVFPQDLHYWFQTENPNMGPQFLPDLSSYPSTTEHYGIGNTSHHMGPNPIGNYGSSSISFSSVDESVCNSVTFDAQREWAFHEVDDLQ* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2515 217 Coils Coil 87 107 - -
Dod01g2515 217 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Dod01g2515 217 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Dod01g2515 217 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 128 - -
Dod01g2515 217 PANTHER LOB DOMAIN-CONTAINING PROTEIN 17-RELATED 1 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2515 Dod-Chr1 64227437 64228663 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2515 7 133 AS2 family AT3G58190 76.744 1.05e-68 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod01g2515 LOB 8.7e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2515 K13945 K13944 gmx:100816960 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2515 01 64227437 64228663 Dod01g2515 01 64227437 64228663 ECH
Dod01g2515 01 64227437 64228663 Dod07g0656 07 8915107 8917655 PCT