Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2476 ATGGCCAGTAACCCTTCCGAGGCTCCCGCCGACGACTTCCTCGAACAAATCCTCGGCCTCCCCACCTTCGCCTCTGCCGACCCCGATGTCGCCGGCCTCGCCGCGGCCTCCGCTCCTCCGATGATGCTCCAGCTCAACTCCGCCGACGCCAACCACCACCACCTCGCCGCCGCCGCCGCAGGAGGAGGGTTTCACTCGCCGGTGTACGGGTTAGGGTTGAGCTTGGAGCAAGGAAAAGGACCGGCAGGAGGAGGAGGAGGAGGGTTCTTGAAGCCCCCCGAGGAGGCTTCCGGTAGCGGGAAGCGCTTTCGCGACGACGTCGTTGATGGCAGGGCTAAGAATGTTTTTCATGGGCAACCCATGCCTAATACTATTCCTGCTGCTCCGCATCCTCCAGCAATGCGTCCTAGGGTGCGAGCTAGAAGAGGACAGGCTACAGACCCACACAGCATAGCTGAACGGTTGCGCAGAGAAAGAATAGCAGAAAGAATCAGGGCTTTGCAAGAACTGGTTCCAAGTGTCAACAAGACAGATAGAGCTGCCATGTTAGATGAAATTGTGGATTATGTCAAGTTCTTAAGGCTTCAAGTAAAGGTCTTGAGCATGAGTAGATTGGGTGGAGCGGGTGCAGTGGCACCATTGGTAACTGACATCCCATTATCATCAGTTGAGGAAGAAGGCAGTGAAAGTGGAAGGAACCGGCCAGCTTGGGACAAATGGTCAAATGATGGCACAGAAAGGCAAGTGGCTAAGCTTATGGAGGAAAATGTTGGGGCTGCCATGCAGTTTCTTCAATCAAAGGCGCTCTGCATCATGCCCATCTCACTGGCATCTGCAATATACCAGTTACAACCCCCAGACACCTCTAGTATAGTGAAGCCTGAAACTAACCCTCCTTCATAG 903 0.5471 MASNPSEAPADDFLEQILGLPTFASADPDVAGLAAASAPPMMLQLNSADANHHHLAAAAAGGGFHSPVYGLGLSLEQGKGPAGGGGGGFLKPPEEASGSGKRFRDDVVDGRAKNVFHGQPMPNTIPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSESGRNRPAWDKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQLQPPDTSSIVKPETNPPS* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2476 300 SMART finulus 150 199 IPR011598 GO:0046983
Dod01g2476 300 MobiDBLite consensus disorder prediction 115 135 - -
Dod01g2476 300 Pfam Helix-loop-helix DNA-binding domain 149 193 IPR011598 GO:0046983
Dod01g2476 300 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 7 283 - -
Dod01g2476 300 MobiDBLite consensus disorder prediction 80 102 - -
Dod01g2476 300 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 142 203 IPR036638 GO:0046983
Dod01g2476 300 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 283 - -
Dod01g2476 300 Gene3D - 139 201 IPR036638 GO:0046983
Dod01g2476 300 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 144 193 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2476 Dod-Chr1 63747632 63752068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2476 64 299 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 78.512 1.55e-117 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod01g2476 HLH 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2476 - - ccaj:109808880 449.899