Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2473 ATGGACACTCACGGCTCGGGGCCCCTCCGCTCTCGCAGCTCGCAGTCCCCTTCGCCCTCCCACTCGGCCTCCGCCTCCGCCACCTCCTCCATCCACAAGCGCAAGCTCGCCTCTGACGACCACGCGCCTCCCTTCCCCCCTTCCTCCTTCTCCGCCGACACCCGCGACGGCGCACTCACCTCCAACGACGACCTCGAGAGCATCTCCGCCCGCGGCGCCGACTCCGACTCCGACGCCGACGACTCCGAGGACGCCGTCGTCGACGACGATGAGGACGACTACGACAACGACTCCTCAATGCGCAACTTCACCGCCGCCAGACTCGACGGAGCCGCTGCCGGCGCCGCCTCCGCGCCGCGAAACACGAAGCTTAAGGCCGATAATTCCGCCACCGTGAAGATCGAGAATTCAGACGGGGGGAAGGACACCGGAGCCGCCGGGAGTGCCGCCGCCGTCGGTTCCGTCGCCTCCGCGGGCGGTGGAGTCCCCGGCATTGTGGTGAAGGAGGACGCGAGTAAGATATTCACGGATAATTTGCAGACGAGTGGGGCTTACAGTGCCAGGGAAGAGAGTTTGAAGAAAGAGGAGGAAGCAGGAAGGCTCAAATTCGTGTGCCTTTCAAATGATGGTATTGATGAGCATATGGTTTGGTTGATTGGATTGAAGAATATATTTGCCAGACAACTTCCTAATATGCCTAAGGAGTACATTGTCCGACTTGTTATGGATAGGAGCCATAAGTCTGTGATGGTTATAAGGCGTAATCATGTTGTTGGAGGCATTACATATCGCCCATATGCAATCCAGAGGTTTGGTGAGATAGCCTTTTGTGCAATTACAGCTGATGAGCAAGTAAAAGGTTATGGTACCAGATTGATGAATCACTTAAAACAACATGCACGCGATGTAGATGGGTTGACACATTTTCTCACATATGCTGACAATAATGCTGTTGGATATTTTATCAAACAGGGATTTACAAAAGAGATTCACTTGGAGAAAGATCGATGGCAAGGGTATATAAAGGATTATGATGGAGGAATTCTCATGGAATGCAAGATTGATCCCAAGCTCCCTTACACTGATTTGTCAACAATGATCCGTCGTCAAAGGCAGGCAATTGATGAAAAGATCAGAGAGCTGTCAAACTGTCACATTGTTTATGCTGGCATTGATTTTCAGAAGAAAGAAGCTGGTGTTCCTAAAAAAATTATCAAAGTTGAGGACATCCCTGGTTTGAGAGAGGCTGGATGGACCCCTGATCAGTGGGGTCATTCAAGATTCAGAAGTCTGAGCAATTCTACAGACAATGCAACAAATCAAAAACATTTGACAGTCTTTATGCGTTCACTTCTAAAGGCAAGTTGCTTATCAATGCACGATCATGCTGATGCTTGGCCATTCAAGGACCCGGTTGATGCACGGGATGTTCCTGATTATTATGACATTATTAAAGATCCAATGGATTTGAAGACAATGACTAAGAGGGTGGAATCGGAGCAATATTATGTCACATTTGAGATGTTTGTTGCGGATGTCAAAAGAATGTTTGCGAATGCACGCACCTATAACTCTCCGGAAACCATATATTACAAATGTGCTACAAGGCTAGAAGCCCACTTTCAGGGCAAAGTGACATCGGGTCTACAGTCTGGTACCAAAATTCAGTAG 1671 0.4949 MDTHGSGPLRSRSSQSPSPSHSASASATSSIHKRKLASDDHAPPFPPSSFSADTRDGALTSNDDLESISARGADSDSDADDSEDAVVDDDEDDYDNDSSMRNFTAARLDGAAAGAASAPRNTKLKADNSATVKIENSDGGKDTGAAGSAAAVGSVASAGGGVPGIVVKEDASKIFTDNLQTSGAYSAREESLKKEEEAGRLKFVCLSNDGIDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRRNHVVGGITYRPYAIQRFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFTKEIHLEKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVYAGIDFQKKEAGVPKKIIKVEDIPGLREAGWTPDQWGHSRFRSLSNSTDNATNQKHLTVFMRSLLKASCLSMHDHADAWPFKDPVDARDVPDYYDIIKDPMDLKTMTKRVESEQYYVTFEMFVADVKRMFANARTYNSPETIYYKCATRLEAHFQGKVTSGLQSGTKIQ* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2473 556 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 215 356 IPR016181 -
Dod01g2473 556 MobiDBLite consensus disorder prediction 113 147 - -
Dod01g2473 556 Gene3D - 423 553 IPR036427 GO:0005515
Dod01g2473 556 MobiDBLite consensus disorder prediction 1 101 - -
Dod01g2473 556 MobiDBLite consensus disorder prediction 77 96 - -
Dod01g2473 556 PRINTS Bromodomain signature 463 476 IPR001487 GO:0005515
Dod01g2473 556 PRINTS Bromodomain signature 512 531 IPR001487 GO:0005515
Dod01g2473 556 PRINTS Bromodomain signature 477 493 IPR001487 GO:0005515
Dod01g2473 556 CDD NAT_SF 248 302 - -
Dod01g2473 556 MobiDBLite consensus disorder prediction 53 68 - -
Dod01g2473 556 SMART bromo_6 441 550 IPR001487 GO:0005515
Dod01g2473 556 Pfam Acetyltransferase (GNAT) family 248 326 IPR000182 GO:0016407
Dod01g2473 556 Pfam Bromodomain 460 535 IPR001487 GO:0005515
Dod01g2473 556 ProSitePatterns Bromodomain signature. 465 523 IPR018359 -
Dod01g2473 556 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 201 355 IPR000182 GO:0016407
Dod01g2473 556 MobiDBLite consensus disorder prediction 1 32 - -
Dod01g2473 556 MobiDBLite consensus disorder prediction 122 136 - -
Dod01g2473 556 CDD Bromo_gcn5_like 444 545 - -
Dod01g2473 556 Gene3D - 197 361 - -
Dod01g2473 556 PANTHER GH11602P 7 556 IPR037800 GO:0004402
Dod01g2473 556 PANTHER BNAC04G26160D PROTEIN 7 556 - -
Dod01g2473 556 ProSiteProfiles Bromodomain profile. 460 531 IPR001487 GO:0005515
Dod01g2473 556 SUPERFAMILY Bromodomain 443 545 IPR036427 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2473 Dod-Chr1 63713932 63722667 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Dod01g2473 Bromodomain 7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2473 K06062 - jre:109008788 878.241