Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2452 ATGAACTATTTGTACCCGGTGAAGGAAGAGTACCCGGAACAACCATCATCATCTCACTTAGGTGGTGGTGGTGGTGGTGATGACAATCCAATGGTTCCTCCTCCGCAGCCAATGGAGGGGCTTTATGAAGCAGGGCCACCACCATTTCTGACCAAGACCTACGATGCAGTGGATGATCCAATCACAAACCACATAGTCTCATGGAGCATGAGTGGCGCTAGCTTTGTTGTTTGGGATCCCAATGCCTTCTCTAGGGGCCTCCTTCCCAGATACTTCAAGCACAACAACTTCTCCAGCTTTGTCAGGCAACTCAACACTTATGGCTTTAGAAAAATTGATCCAGATAAATGGGAGTTTGCAAATGAAGGATTCTTTAGAGGGCATAGGCACTTGTTGGCAAACATAAGGAGAAGAAAGGCACCATCCCAGCCTAGCATATCCCAACAAACACAACAAGCGCAGGGAGAGGGTCACTGTGTTGAAGTTGGCCGTTTTGGGCTTGATGAAGAGATTGACCGTTTGAGGCGTGACAAGCAGGTGTTAATGATGGAGCTTGTGAGGCTGAGGCAGCAGCAACAGAACACTAAAACCAACCTTCAAGCAATGGAGCGAAGGCTTAGAGGTACAGAAATAAAGCAGCAACAGATGATGGCTTTCTTGGCTAGAGCCATGAAGAACCCGGTATTCATCCAGCAACTGCTCCAACAGAAGGACAAGAGGAAGGAGCTTGAAGATGCCATGAGCAAGAAGAGGAGAAGGCCAATTGAGCAAGGGCCTGGTAGTGGTGGTGGTGTGAATGTTGTTGGGGAATCAAGCAGTAGTGTGAAGGCTGGGCCTTCTTCAGAGTTTGGGGAATATGGGTTTGGAGTGTCTGAGCTTGAGGTGCTGGCTATGGAGATGCAAGGTCTTGGAAGAGGTAATAGGACAGAACAAGAGGGAGGGAATAATGAGGCAATGGGGACACGAGAGAGGCTGGACAAGGAGCTTGATGAAGGGTTCTGGGAGGAGCTGTTCAGTGAGAGATTTGAGGGTGAATTGGACATTCCACCTTCTCAAGGTGGTGAAGATAATGGAGTTGTCAATGTGTTGGCCGATCGCTTAGGTTGCTTGGGTTCAAGTCCTAAGTGA 1128 0.4867 MNYLYPVKEEYPEQPSSSHLGGGGGGDDNPMVPPPQPMEGLYEAGPPPFLTKTYDAVDDPITNHIVSWSMSGASFVVWDPNAFSRGLLPRYFKHNNFSSFVRQLNTYGFRKIDPDKWEFANEGFFRGHRHLLANIRRRKAPSQPSISQQTQQAQGEGHCVEVGRFGLDEEIDRLRRDKQVLMMELVRLRQQQQNTKTNLQAMERRLRGTEIKQQQMMAFLARAMKNPVFIQQLLQQKDKRKELEDAMSKKRRRPIEQGPGSGGGVNVVGESSSSVKAGPSSEFGEYGFGVSELEVLAMEMQGLGRGNRTEQEGGNNEAMGTRERLDKELDEGFWEELFSERFEGELDIPPSQGGEDNGVVNVLADRLGCLGSSPK* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2452 375 SMART hsfneu3 45 138 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod01g2452 375 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 31 352 - -
Dod01g2452 375 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 31 352 IPR027725 -
Dod01g2452 375 MobiDBLite consensus disorder prediction 10 41 - -
Dod01g2452 375 Pfam HSF-type DNA-binding 49 138 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod01g2452 375 PRINTS Heat shock factor (HSF) domain signature 49 72 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod01g2452 375 PRINTS Heat shock factor (HSF) domain signature 87 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod01g2452 375 PRINTS Heat shock factor (HSF) domain signature 100 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod01g2452 375 MobiDBLite consensus disorder prediction 240 281 - -
Dod01g2452 375 MobiDBLite consensus disorder prediction 240 256 - -
Dod01g2452 375 Coils Coil 233 253 - -
Dod01g2452 375 ProSitePatterns HSF-type DNA-binding domain signature. 88 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod01g2452 375 SUPERFAMILY "Winged helix" DNA-binding domain 45 138 IPR036390 -
Dod01g2452 375 Coils Coil 171 212 - -
Dod01g2452 375 Gene3D - 42 139 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2452 Dod-Chr1 63465465 63470255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2452 27 373 HSF AT3G22830 53.476 4.04e-126 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Dod01g2452 HSF_DNA-bind 8.8e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2452 K09419 - gmx:100794264 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2452 01 63465465 63470255 Dod07g0598 07 7922293 7924928 PCT