Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2447 ATGGAACCAAATTGCACGATCAACTGTCGACGGCCGGAGTTTTTTCCGGCCGGTGGCAGCCACCTGCCGGAGAGTCCAAGGGTGCCAATGGAGTTTCTGTCGAGGTCATGGAGTGCCTCAGCTCTTGAGGTCTCAAAAGCACTTGCACCACAACCACCTCTTCCTCCATGCATACCTTCTTCCAAGCCTCCAATAAATGGTGGGGCTGCTGCTGCTGCTGCTACTACTACAACTGCTGCTTCCATTCCTGAAGAAACTGGTGTTGGTGGAGACTCTGAGGAGTCCTCACTGATCTCATCAACTTTGTCCAAGAACCAGTTCTCTTTTGCTTCCTCTACTACCTCCCAGCTTGTCCTTGAGCGCATTATGTCACAGTCCGCAAGAGAGGAAGTGTCGCCATTAACGTCGGGTAGACTATCTCACAGCAGTGAGCCTTTGAACGGTGGTGGTTCATTAACCGGAACTGATAGCCCGCCAATTTCACCTTCTGATGAATTTGATGATGTTGTTAAGTTTTTTCGGGCAAACAATTCCATTCACCCTTTATTCAACGGTGGAAGAGCCAGTGCTACTATGGGAAACGGCACGGCATGTTCAGCTCCTAAGACTGTTGGAAGATGGTTGAAGGACAGAAGAGAGAAGAAGAAAGAGGAACACAGAACACAGAATGCTCAGTTGCACGCTACCATCTCAGTGGCCGGGGTGGCAGCTGCAGTGGCTGCCATAGCAGCTGCAACAGCTGCCTCATCTGCACCCAGCAAGGATGAGAGGATGGCAAGGACTGACATGGCTGTGGCCTCTGCGGCCACATTGGTTGCCGCGCAGTGTGTCGAGGCTGCTGAGGCAATGGGAGCTGAGAGAGACCACCTTGCTTCTGTGGTCAGCTCAGCTGTCAATGTCCGCTCTCATGATGATATCACCACTCTTACTGCTGCTGCTGCTACAGCTCTACGAGGGGCAGCAACCTTGAAAGCAAGAGCATTGAAGGAAGTGTGGAACATTGCTGCAGTGACACCACTGGAGAAAGGCATAGCGGGGATTGGAATTCGTGGTAAAGGTACTAATAATAGCAACACTAGCAACACTGATAGTGGGGAGATTCTCAATGGAGAAAATTTTCTAGGTATCTGCAGCCAAGAGTTGCTTGCTAAGGGCAGTGAATTACTCAAACGCACCCGAAAAGGTGATCTTCACTGGAAAATAGTTTCTGTTTATATACATCGAACAGGCCAGGTGATGCTGAAAATGAAGAGCAGACATGTTGCAGGAACCATTACCAAAAAGAAAAAGAATGTTGTGCTAGATGTGTGCACAGATTTACCAGCATGGCCTGGAAGACATCTGTTTCATGATGGTGAAAAACGACGGTACTTTGGATTGAAGACAGATGCAAGGGGGATTGTGGAGTTCGAGTGCAGAAATCAAAGGGAATATGATATCTGGACCCAAGGGGTTTCCAGGCTTCTCTCCATTGTTGCACAAAGACAAAACAGATTTGGGAATTGA 1506 0.4894 MEPNCTINCRRPEFFPAGGSHLPESPRVPMEFLSRSWSASALEVSKALAPQPPLPPCIPSSKPPINGGAAAAAATTTTAASIPEETGVGGDSEESSLISSTLSKNQFSFASSTTSQLVLERIMSQSAREEVSPLTSGRLSHSSEPLNGGGSLTGTDSPPISPSDEFDDVVKFFRANNSIHPLFNGGRASATMGNGTACSAPKTVGRWLKDRREKKKEEHRTQNAQLHATISVAGVAAAVAAIAAATAASSAPSKDERMARTDMAVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARALKEVWNIAAVTPLEKGIAGIGIRGKGTNNSNTSNTDSGEILNGENFLGICSQELLAKGSELLKRTRKGDLHWKIVSVYIHRTGQVMLKMKSRHVAGTITKKKKNVVLDVCTDLPAWPGRHLFHDGEKRRYFGLKTDARGIVEFECRNQREYDIWTQGVSRLLSIVAQRQNRFGN* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2447 501 Pfam Plant pleckstrin homology-like region 387 492 IPR013666 -
Dod01g2447 501 PANTHER AUXIN CANALIZATION PROTEIN 1 500 - -
Dod01g2447 501 PANTHER EXPRESSED PROTEIN 1 500 IPR040269 -
Dod01g2447 501 MobiDBLite consensus disorder prediction 128 160 - -
Dod01g2447 501 Pfam Auxin canalisation 23 343 IPR008546 -
Dod01g2447 501 MobiDBLite consensus disorder prediction 128 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2447 Dod-Chr1 63412982 63417837 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2447 - - aip:107645207 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2447 01 63412982 63417837 Dod01g2447 01 63412982 63417837 ECH
Dod01g2447 01 63412982 63417837 Dod07g0586 07 7691841 7695619 PCT