Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2445 ATGGGTAACATGGACTGTGGTTACCCTTCGGCCACGAGCGTTAACGGGTGCACGCACCCGCGTGTAGCCATTCCGCCACACCAACCGTTCTTGAAGTCGCTGAAGTACTCGTTGAAGGAGACTTTCTTCCCGGATGACCCGTTGAGGCAGTTCAAGAACCAGCCAGCGTCAAGGAGGGCGGTGCTTGCCCTTCAGTACTTGCTGCCCATATTCGAGTGGGCACCACAGTACACACTCAAGTTCTTGAAATCGGACCTTATTTCCGGCATCACCATCGCTAGCTTGGCTATTCCTCAAGGGATCAGTTATGCCAAGCTCGCCAACCTACCTCCAATTCTTGGACTATATTCGAGCTTTATACCACCGTTGGTGTATGCCATGATGGGTAGCTCTAGAGATTTGGCAGTGGGGACTGTGGCGGTTGGATCGCTTCTCATGGCTTCCATGTTGGGTAGGGAAGTTACTCCCATCGAGAATCCAAAGCTTTATCTGCACCTCGCTTTCACAGCTACATTCTTTGCCGGAGTCTTGCAGGCATCACTGGGCCTCTTTAGGTTAGGGTTTGTAGTGGACTTTCTGTCACATGCAACCATTGTAGGGTTCATGGGAGGAGCAGCCACAGTGGTTTGCCTGCAACAGCTGAAATCAATTCTAGGTCTTGAGCATTTCACCCACGATGCCGATCTCGTGTCAGTGATGCGTTCTGTTTTTACCCAAACTCATCAGTGGAGGTGGGAAAGTGCTGTGTTAGGATGCTGCTTCATTTTCTTCCTCCTCATCACGAGATACTTCAGCAAACGACAACCGAAGTTCTTTTGGGTGTCAGCGATGGCGCCATTGACATCTGTAATCTTGGGAAGTCTGCTTGTTTATCTCACTCACGCACAGAAGCACGGCGTTCAAGTGATAGGAGAATTGAAGAAGGGGCTAAACCCACCGTCGCTGACAGATTTGGTGCTAGTGTCGCCTTATATAACCACAGCAATCAAGACTGGGCTTATCACCGGTATTATAGCGCTTGCTGAAGGAATAGCAGTGGGAAGAAGCTTCGCAATGTTCAAGAATTACCACATTGATGGCAACAAAGAGATGATAGCCATTGGGACCATGAACATTGTTGGTTCCTTCACCTCTTGCTACCTCACAACAGGACCATTTTCGCGTTCGGCTGTGAACTACAATGCTGGTTGCAAGACTGCAGCATCAAACATTGTAATGTCAATTGCAGTCATGTTGACATTGTTGTTCCTGACACCCTTGTTCCATTACACACCCCTGGTGGTGCTATCAGCCATCATTGTATCTGCGATGCTTGGCCTCATAGATTATGAAGCAGTCATCCACTTGTGGAAAATCGACAAATTCGATTTCTTAGTGTGCATTAGTGCATATGTTGGCGTGGTCTTTGGCAGTGTTGAAATTGGCTTAGTCTTAGCAGTTGCAATATCAGTAATTCGTGTACTTCTATTTATTGCAAGGCCAAGGACATTTGTTTTAGGCAACATTCCAAATTCTGGAGCATACAGAAATGTGGAACAATATCCCAATGCAAAACATATTCCTGGAATCCTAATTCTTAAAATTGATGCGCCAATTTACTTTGCCAATTCAGGCTATTTAAGAGAGAGGATCATAAGGTGGATTGATGATGAGGAAGACAGAATCAAAGCTACAGGACAGAACAGCTTGCAGTATGTGATAATGGACATGACTGCTGTTGGTAACATTGATACAAGTGGAATAAGCATGCTTGAAGAGGTCAAGAAGATTGTTAACAGAAGAGGGCTACAGCTTGTTTTGGTCAATCCTGGAAGCGAGGTGATGAAGAAAATGAATAAATCAAAGTTCCTTGATGAAATAGGGGATAAATGGGTCTATCTGACAGTTGAAGAGGCTGTAGGAGCATGCAACTACATGCTCCATACATATCAACCGAACCCCAAGAAAGATGAATCAGAAGGTTGGAACAGTGTGTGA 1977 0.4593 MGNMDCGYPSATSVNGCTHPRVAIPPHQPFLKSLKYSLKETFFPDDPLRQFKNQPASRRAVLALQYLLPIFEWAPQYTLKFLKSDLISGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLVYAMMGSSRDLAVGTVAVGSLLMASMLGREVTPIENPKLYLHLAFTATFFAGVLQASLGLFRLGFVVDFLSHATIVGFMGGAATVVCLQQLKSILGLEHFTHDADLVSVMRSVFTQTHQWRWESAVLGCCFIFFLLITRYFSKRQPKFFWVSAMAPLTSVILGSLLVYLTHAQKHGVQVIGELKKGLNPPSLTDLVLVSPYITTAIKTGLITGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIVGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMSIAVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYEAVIHLWKIDKFDFLVCISAYVGVVFGSVEIGLVLAVAISVIRVLLFIARPRTFVLGNIPNSGAYRNVEQYPNAKHIPGILILKIDAPIYFANSGYLRERIIRWIDDEEDRIKATGQNSLQYVIMDMTAVGNIDTSGISMLEEVKKIVNRRGLQLVLVNPGSEVMKKMNKSKFLDEIGDKWVYLTVEEAVGACNYMLHTYQPNPKKDESEGWNSV* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2445 658 ProSitePatterns SLC26A transporters signature. 111 132 IPR018045 GO:0008271|GO:0008272
Dod01g2445 658 Gene3D STAS domain 493 638 IPR036513 -
Dod01g2445 658 SUPERFAMILY SpoIIaa-like 515 637 IPR036513 -
Dod01g2445 658 Pfam Sulfate permease family 82 462 IPR011547 GO:0016021
Dod01g2445 658 TIGRFAM sulP: sulfate permease 69 632 IPR001902 GO:0015301|GO:0016020|GO:0055085
Dod01g2445 658 ProSiteProfiles STAS domain profile. 513 636 IPR002645 -
Dod01g2445 658 PANTHER SLC26A/SULP TRANSPORTER-RELATED 2 656 - -
Dod01g2445 658 CDD STAS_SulP_like_sulfate_transporter 514 629 - -
Dod01g2445 658 Pfam STAS domain 514 632 IPR002645 -
Dod01g2445 658 PANTHER SULFATE TRANSPORTER 2 656 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2445 Dod-Chr1 63367470 63376530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2445 12 646 Inorganic Solute Cotransporters AT4G02700 68.553 0.0 909
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2445 K17471 - gmx:100791091 1151.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2445 01 63367470 63376530 Dod01g2445 01 63367470 63376530 ECH
Dod01g2445 01 63367470 63376530 Dod07g0582 07 7630776 7639111 PCT