Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2431 ATGCCAAGCACGCTAAGAACCGGAAGAAGAAGGAGAACTAGAAACAACCTCATGCACCTCGACCTATGCTTCACAAATTTCATACAACCCTTCTTCATTCACGAATCTCCTCCTCCGAGCCCCGCTTCCACTTCCTCATCACCCCTCCATCATCATCACCGCCACATCGATCACAACCGTCCATCACCCTCCACCACCACAACCACAACATCAATAATCAAGAACTCCAGCACTCTGTACGACCACACCTCAACCGCCGAACCCGAACCTGCAGATTTCGCAACCGCCTTCGCCTCCCAACGGTTCTTCTTCTCATCCCCAGGCCAATCCAACTCCATCGTCGAATCCACCGCACCTTCCTCCTCCTCATCGTCATCACCGCTATCCTCCTCGTCGCTAACCGCCACCGCTCGGCCGCCACCCGATGCTTCCGCCGCAGCTGCCAACAACAACAGTAGCAGAAGCGAACTTGTATTGTTTGACGGGAGCGTGGCGGTGCCGACGTACTCGCCGGACCCTTACCTTGACTTCCGGCGGTCGATGCAGGAGATGGTGGAGGCGCGTCCCGAGGTGATGACGGACGTGAAGTCCAACCTGGACGTGTTGCAAGAGCTTCTACTGTGCTACCTTGCGCTCAACCCGAAGAGCACCCACAAGTTCATTCTCGGTGCCTTTGCCGATCTTCTCGTTACTCTCATGGCGCTTTCTTCTTCTTCTTCTTGCTCTTGTTCTTTGCCGTCGCCACCGCTTCCACCGCAGGAGAATCCCGACTTGGATGATGTGGCCGGCGGTGGTGGTTGTTAG 804 0.5585 MPSTLRTGRRRRTRNNLMHLDLCFTNFIQPFFIHESPPPSPASTSSSPLHHHHRHIDHNRPSPSTTTTTTSIIKNSSTLYDHTSTAEPEPADFATAFASQRFFFSSPGQSNSIVESTAPSSSSSSSPLSSSSLTATARPPPDASAAAANNNSSRSELVLFDGSVAVPTYSPDPYLDFRRSMQEMVEARPEVMTDVKSNLDVLQELLLCYLALNPKSTHKFILGAFADLLVTLMALSSSSSCSCSLPSPPLPPQENPDLDDVAGGGGC* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2431 267 Pfam Transcriptional repressor, ovate 170 232 IPR006458 -
Dod01g2431 267 MobiDBLite consensus disorder prediction 244 267 - -
Dod01g2431 267 MobiDBLite consensus disorder prediction 109 150 - -
Dod01g2431 267 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 19 238 IPR038933 GO:0045892
Dod01g2431 267 MobiDBLite consensus disorder prediction 35 70 - -
Dod01g2431 267 MobiDBLite consensus disorder prediction 109 138 - -
Dod01g2431 267 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 164 233 IPR006458 -
Dod01g2431 267 ProSiteProfiles OVATE domain profile. 166 231 IPR006458 -
Dod01g2431 267 PANTHER TRANSCRIPTION REPRESSOR OFP12 19 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2431 Dod-Chr1 63211564 63212774 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Dod01g2431 Ovate 1.1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2431 - - aprc:113871147 181.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2431 01 63211564 63212774 Dod07g0565 07 7465669 7466755 PCT