Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2423 ATGTCTATCTCTCTCCCACATTTAGGTTCTCAAGTCAAACCTGTAAATACTGTTGGAGAGAACCCTGGAATTCTTGCTGGACATGCCTCTACTGAAAACAAGTCAAGTGTTCAGGCTCCAAAAGCTCCTAAGAAGATAGTTAATTTAAATGAGCCCCAAACATGCAAAAATAAAGGGTGTGGTCAAAGGGACCAGAATGTACACTTGAGGATTCAGAAGGGATACAAATTCTGCCTCCTCGGCAAATTGTCAACTGAGGTTGGATGGAACTATTATGATACCATCAGGGAACTTGAAAAGAAGAGAAAGGAAAAAGCACATTTGGCTTATGAGAGAAAGAAGCAGCTCGCCAAATTAGGGATGAAAGCTGAGAAGGTTGCTGATGAGAAGCTTGGTCCCTAA 402 0.4179 MSISLPHLGSQVKPVNTVGENPGILAGHASTENKSSVQAPKAPKKIVNLNEPQTCKNKGCGQRDQNVHLRIQKGYKFCLLGKLSTEVGWNYYDTIRELEKKRKEKAHLAYERKKQLAKLGMKAEKVADEKLGP* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2423 133 PANTHER RIBOSOMAL PROTEIN L13 64 132 IPR005822 GO:0003735|GO:0005840|GO:0006412
Dod01g2423 133 MobiDBLite consensus disorder prediction 1 17 - -
Dod01g2423 133 PANTHER 60S RIBOSOMAL PROTEIN L13A-4 64 132 - -
Dod01g2423 133 Gene3D - 93 133 - -
Dod01g2423 133 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2423 Dod-Chr1 63083351 63084215 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2423 69 132 Cytoplasmic Ribosomal Protein Gene Family AT5G48760 75.000 2.16e-29 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2423 K02872 - cit:102617059 111.694