Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2401 ATGAATAGAGAAGAGACTCGTAGAGGTTTGAAAAGGAAGCCCCCGGAAATGCTTCGTGAGGGGCAAGAGCAGAGATATTACAATATGGATCACAGACCTTATGATAGGAACGCTCTTCCTCCTGGTTGGTTAGACTGCCCACCACATGGTCATGAACTTGGATGCTTAATACCTTCAAAGGTTCCACTTGGTGAATCTTTCAATGATTACATTCAAGGTCAAAAATATACTCCCAAGCAAGCAATTCTTCAGCAACGAGCTTCAGGTAGAGAACTTGGTTTGGTGATTGATATGACAAATACTACTCGTTACTATCCATTATCAGATTGGACAAAAGAAGGGATTGGTCATGTTAAGATAAGATGCAAAGGAAGAGATTCTGTACCTGATGATGAATCTGTAAAAAAATTTTGCGATGAGACGTTCTTTTTAGGTTCTGGATTTTTGCTCTCGAAGAACAAATACAAAGAAATATATTCTTGTACATTGCACACATGGTCATAA 504 0.3889 MNREETRRGLKRKPPEMLREGQEQRYYNMDHRPYDRNALPPGWLDCPPHGHELGCLIPSKVPLGESFNDYIQGQKYTPKQAILQQRASGRELGLVIDMTNTTRYYPLSDWTKEGIGHVKIRCKGRDSVPDDESVKKFCDETFFLGSGFLLSKNKYKEIYSCTLHTWS* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2401 167 MobiDBLite consensus disorder prediction 1 22 - -
Dod01g2401 167 Gene3D Protein tyrosine phosphatase superfamily 15 157 IPR029021 -
Dod01g2401 167 PANTHER MRNA-CAPPING ENZYME 3 142 - -
Dod01g2401 167 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 39 140 IPR029021 -
Dod01g2401 167 PANTHER MRNA-CAPPING ENZYME-LIKE 3 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2401 Dod-Chr1 62728232 62733947 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2401 22 141 Protein tyrosine phosphatase (PTP) family AT3G09100 57.851 2.46e-43 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2401 K13917 - gmx:100778292 239.195