Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2400 ATGATTGTTCATTTTCTTGTGCGTACCGAATCAATTTCTGTGACCGAGGCTATAAATAAATTTGCTTGGGCTCGCCCCCCAGGAATTTACAAGCAGGATTACATTGATGCCCTATACATGTTTTATCATGAAAAGAAGCCTGAAGATCTTGTTTGTCCTCAAACTCCAGAATGGAAGAGACTTTCTGATCCTGATTTTCATTGTGTGGCTGGCCCAGCTGGAGACAATTACAGTGATATTCCTCAGCAGGAGAATATTATGAGGAATGAAGTATTGACAAATGATGATGTTTTGGGAGATCCCATTCCTTCAGACAAGCTGCATACAATGCAAGAAGTTTGTTATCAACTGCTCAAGCTGGGCACAGGGGGGAGAGGACGCTCACAGTTTCCTGGATCACACCCGGTTTCTTTGAACAGTGACAATCTTCAACTCTTAAAACAACGATATTACTATGCCACATGGAAAGCTGATGGGACACGATATATGATGCTGATTACTTGGGATGGATGCTATCTTATTGACAGAAAATTTCTTTTCCGAAGGATCAATATGCGGTTTCCTTGCAGATACTCAAGTGGGGGTACACCTGAGAAGAATCACCACTACACATTACTTGATGGGGAGATGATTATTGACATGGATCCTCATACACACAAGCAAGAGAGAAGATACCTCATTTATGATCTCATGGCAATTAATCAAGTCTCTTTAATAGAGCTGCCATTCTACGAGAGGTGGAAATTGCTGGAGAAAGAAGTAATTGAACCTCGTAACTTGGAACGTGAGGGTCTTTCCAAGAGTATAAATCCTTATTACAGATATGACTTGGAACCATTTAGTGTAAGGAGGAAAGGTTTTTGGTTACTGTCTACTGTGTCAAAGCTCCTTCACAAATTCATTCCACAGCTCTCGCATTCGTCAGATGGTCTTGTATTCCAGGGTTGGGATGATCCATATGTCCCTCGCACACATGAAGGTCTTCTGAAGTGGAAATGCCCTCAAATGAACTCTGTTGATTTCCTCTGTGAGGTAGGAGCTGATAATCGTCCCCTCCTTTTTCTGTTTGAACGTGGAAGGAAAAAGTTGATGGAAGGCAATAAAGTTAATTTTAAAGATGCATCAGATATTTCTTCGTACTCAGGGAGGATCATTGAGTGCTACTGGGATCCTGTGGAGCATCATTGGGTCTGTATGCGGATCAGATTTGACAAAGCAACTCCGAATGAAGTCAATACGTATAGAAAGGTAATGCGAAGCATAAAGGATAACATTACAGAAGAAGTGCTGTTGAATGAGATCAATGAGATCATTCGCCTACCCTTGTATGCAGACAGAATACAAAGGGATATCAAGGCTCACCAACATATGGTGTCCTCACGGCGCAAGTAA 1392 0.4167 MIVHFLVRTESISVTEAINKFAWARPPGIYKQDYIDALYMFYHEKKPEDLVCPQTPEWKRLSDPDFHCVAGPAGDNYSDIPQQENIMRNEVLTNDDVLGDPIPSDKLHTMQEVCYQLLKLGTGGRGRSQFPGSHPVSLNSDNLQLLKQRYYYATWKADGTRYMMLITWDGCYLIDRKFLFRRINMRFPCRYSSGGTPEKNHHYTLLDGEMIIDMDPHTHKQERRYLIYDLMAINQVSLIELPFYERWKLLEKEVIEPRNLEREGLSKSINPYYRYDLEPFSVRRKGFWLLSTVSKLLHKFIPQLSHSSDGLVFQGWDDPYVPRTHEGLLKWKCPQMNSVDFLCEVGADNRPLLFLFERGRKKLMEGNKVNFKDASDISSYSGRIIECYWDPVEHHWVCMRIRFDKATPNEVNTYRKVMRSIKDNITEEVLLNEINEIIRLPLYADRIQRDIKAHQHMVSSRRK* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2400 463 PANTHER MRNA-CAPPING ENZYME 1 463 - -
Dod01g2400 463 CDD Adenylation_mRNA_capping 105 332 IPR001339 GO:0004484|GO:0005524|GO:0006370
Dod01g2400 463 PANTHER MRNA-CAPPING ENZYME-LIKE 1 463 - -
Dod01g2400 463 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 102 333 - -
Dod01g2400 463 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 1 59 IPR029021 -
Dod01g2400 463 Gene3D DNA ligase/mRNA capping enzyme 93 330 - -
Dod01g2400 463 Gene3D - 331 440 IPR012340 -
Dod01g2400 463 Pfam mRNA capping enzyme, catalytic domain 134 332 IPR001339 GO:0004484|GO:0005524|GO:0006370
Dod01g2400 463 SUPERFAMILY Nucleic acid-binding proteins 335 448 IPR012340 -
Dod01g2400 463 PIRSF mRNA_capping_HCE 1 463 IPR017074 GO:0004484|GO:0006370|GO:0140818
Dod01g2400 463 Pfam mRNA capping enzyme, C-terminal domain 337 431 IPR013846 -
Dod01g2400 463 Gene3D Protein tyrosine phosphatase superfamily 1 68 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2400 Dod-Chr1 62721502 62728218 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2400 1 453 Protein tyrosine phosphatase (PTP) family AT3G09100 63.478 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2400 K13917 - gmx:100778292 845.499