Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2396 ATGGAAGGACAAAGTAACCAAGAGAACCCTTTGCAGAAAATGTTCTTTACCTCTGGAGGAACCATTAGCCATGTTTCTGGTTCAGCTTCTGCTGAGGATGATCCAAACATGCAACATGTTCTTGCAGCTGAAAGGAGTGGGAGCCAGTGGACTTGCCTCCAAAAACCATCTCCTAACTATGTTCAATATATGACTGAATCCTCAACTTATCTGCCAAAGACCGAAGTAGATATGATTGAGAGCAATTATGTACCTGTTGGCAGCATAACCGATGTTAATGAAACAGAAAAAAACTTCTTTTATAATGACCCAGGAAACGCTTGCGGCTTTAAAACTAATGATCATTCTTCCACTGAAGTAGACATTGGGAAGGTGGGGTTTTGGAGACCTGAAGAAGGTGAGGTCCACCAGGAAGCCATGCAATTTGAAGGTACTCAACATGAGCATCTTGTCTATACTGAGAGTTATGCTACGTGGACAGAAGAACCAGTTGGTCATAAGCATAATGTTTCAAGACTTGATCCAATGGTAATGGCTAGTGCATCTTGTTTCCTTCCCAAACCAGGAAGCAGCAGCTCAACAAAACAGAAAACCACTGACCGTCAACGCAGGCAACGTATTGTTGATAATCTGAATGCCTTACACGATTTGCTTCCAAATCGAGCAGAGGAGGGTGGTCAAGCTTATATACTGGACGACATCATTGACCATGTTAAGTATTTGCAACTTCAACTAAAGGAACTAAGTGGAAGTAGGCTGCAAGCTGAATCAACTGCTAATGTACCACTTGTTTTTCATGAGGGTTATGGCCATTACATTGACCAACAGGTGCTCAATGAGCCCCTTGAGGAGATGATGGGGAAAGTACTGGAAGAGCATCCAGCATCAGCCAGCGAGCTACTTGAGAGTAAGGGCCTTGTCCTGCTGCCTGCGGATTTGGTTGAAGATTTACGCCAAGCCATGCAAATGTTCGGTGGGAATGCACTTGTCTGA 993 0.4391 MEGQSNQENPLQKMFFTSGGTISHVSGSASAEDDPNMQHVLAAERSGSQWTCLQKPSPNYVQYMTESSTYLPKTEVDMIESNYVPVGSITDVNETEKNFFYNDPGNACGFKTNDHSSTEVDIGKVGFWRPEEGEVHQEAMQFEGTQHEHLVYTESYATWTEEPVGHKHNVSRLDPMVMASASCFLPKPGSSSSTKQKTTDRQRRQRIVDNLNALHDLLPNRAEEGGQAYILDDIIDHVKYLQLQLKELSGSRLQAESTANVPLVFHEGYGHYIDQQVLNEPLEEMMGKVLEEHPASASELLESKGLVLLPADLVEDLRQAMQMFGGNALV* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2396 330 CDD bHLH_AtbHLH_like 199 249 IPR045239 -
Dod01g2396 330 MobiDBLite consensus disorder prediction 184 204 - -
Dod01g2396 330 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 22 314 - -
Dod01g2396 330 PANTHER TRANSCRIPTION FACTOR BHLH66-LIKE ISOFORM X1 22 314 - -
Dod01g2396 330 Gene3D - 191 261 IPR036638 GO:0046983
Dod01g2396 330 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 191 241 IPR011598 GO:0046983
Dod01g2396 330 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 194 255 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2396 Dod-Chr1 62617626 62621480 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2396 200 320 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 36.066 3.19e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2396 - - gmx:100788949 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2396 01 62617626 62621480 Dod01g2396 01 62617626 62621480 ECH