Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2370 ATGGAGGAAGAGGTGGATTCCCCAGTTTGTGTTCTTGAGGACTATCTCAGGAGCACAGAGTCAGAAGCAAGTTGTTCCAAAGAACCCACAGTGGATTCTGAGTGCCAAGACAAGTCAAAACCTGCTTCCAAATGGCATACATTTCTCCAATTGTTGAGAGCCTGCAGGTCAAAGAAGCCCTTATTGGCCACATTGCATCCTCTCAGTGTCCTCAAGCTCTCAAGAAGAATGAGTGGCAGCATTAGGGAGACTAGTACTACACTTTCAAGTTGTAGCATGGATTCAGATTCCTTCTTGCACAGTTCACCCTGGAAGATCTTCACTCAGCATGAGATACAAATTGCTACTAAACATTTCAGCCAAGAAAATTTGATTGGAAAAGGTGGTTATGCTGAGGTCTACAAAGGGTGTTTGCCAAATAATCATCAGCTAGTAGCTGTTAAACGGCTAACAAGAGGAACAAGTGATGAAATCATAGGGGACTTCTTATCAGAACTTGGGATCATGGCACATGTAAACCACCCCAATACTGCTAAATTGGTTGGTTATGGAGTGGAAGGGGGAAGGCATTTGGTGCTTGAATTGTCTGAAAAAGGAAGCCTAGCTTCTGTGCTTTATGGTTCCAAGGAGAAACTTCCATGGTTCATTAGGCAGAAAATCGCATTAGGAACAGCTGAGGGTATATTATATCTTCATGAGGGTTGTCAAAGAAGAATTATTCATAGAGATATAAAAGCAGCAAATATATTGCTTACTGAAGATTTTGAGCCTCAGATTTGTGATTTCGGGCTAGCAAAATGGCTACCGGAGAACTGGACTCATCACAGCGTTACAAAATTTGAAGGAACCTTTGGATACCTTGCTCCTGAATACTTGCTTCATGGCATAGTAGACGAGAAAACAGATGTATTTGCCTTTGGTGTGGTGCTACTGGAATTAGTCACTGGGCGGCGGGCACTTGATTATTCACAACAAAGCCTTGTTTTGTGGGCAAAACCTTTGCTGAAAAAGAATGATGTTAGGGAGCTGATTGACCCTTCGCTAGGCGATGACTTTGACCATAGGCAGATTAATATCATGCTCTTGGCAGCTTCTTTATGCATACAACAATCCTCAATTCGTCGTCCCTCAATGAGACAGATTGTACAGCTTCTGAAAGGCAACCTTAGCTGCTTTAAATTTGCCAATAAATCTCGACTTCCATTTTTGGAAAGAGTCTTTCAAGAAGAGCTCATTGACTCTGATTAG 1248 0.4223 MEEEVDSPVCVLEDYLRSTESEASCSKEPTVDSECQDKSKPASKWHTFLQLLRACRSKKPLLATLHPLSVLKLSRRMSGSIRETSTTLSSCSMDSDSFLHSSPWKIFTQHEIQIATKHFSQENLIGKGGYAEVYKGCLPNNHQLVAVKRLTRGTSDEIIGDFLSELGIMAHVNHPNTAKLVGYGVEGGRHLVLELSEKGSLASVLYGSKEKLPWFIRQKIALGTAEGILYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLAKWLPENWTHHSVTKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVVLLELVTGRRALDYSQQSLVLWAKPLLKKNDVRELIDPSLGDDFDHRQINIMLLAASLCIQQSSIRRPSMRQIVQLLKGNLSCFKFANKSRLPFLERVFQEELIDSD* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2370 415 SMART serkin_6 119 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2370 415 Gene3D Phosphorylase Kinase; domain 1 90 194 - -
Dod01g2370 415 PANTHER PROTEIN KINASE FAMILY PROTEIN 1 413 - -
Dod01g2370 415 Gene3D Transferase(Phosphotransferase) domain 1 197 398 - -
Dod01g2370 415 Pfam Protein kinase domain 120 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2370 415 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Dod01g2370 415 PANTHER OS08G0249100 PROTEIN 1 413 - -
Dod01g2370 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Dod01g2370 415 ProSiteProfiles Protein kinase domain profile. 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2370 415 SUPERFAMILY Protein kinase-like (PK-like) 104 394 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2370 Dod-Chr1 62302319 62306217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2370 107 387 Receptor kinase-like Gene Family AT1G53420 42.907 1.82e-67 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Dod01g2370 Pkinase 1.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2370 - - gmx:100780587 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2370 01 62302319 62306217 Dod01g3418 01 75342004 75346471 ECH
Dod01g2370 01 62302319 62306217 Dod01g2370 01 62302319 62306217 ECH
Dod01g2370 01 62302319 62306217 Dod07g0499 07 6564139 6569020 ECH
Dod05g2751 05 53578370 53580513 Dod01g2370 01 62302319 62306217 ECH
Dod03g0747 03 9258090 9262407 Dod01g2370 01 62302319 62306217 ECH
Dod01g2370 01 62302319 62306217 Dod07g0499 07 6564139 6569020 PCT