Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2347 ATGTTGTGCTGCGGAGGTGCAGAGGAGGAGAGCAGCGGTCCACCTGCAAACCAATACACTGCACCACCTAGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGTAACACATATGGTGGAGCCAGAGGAGGAGGCGGAGTAGGCAATGACAGAGGAGAGCCGAGGAGCAATGTTGCCAGGAGTGGTGCTCCACAGAAAGCACTGCCAATTGAGATACCAGCTATACCTCTGGACGAGTTAAATAGGTTAACAGGCAACTTTGGTTCAAAGGCTTTCATTGGCGAAGGTTCCTATGGTCGGGTCTACTTTGCAAAGTTGAGTAATGGTACTGATGCCGCAATCAAGAAGCTGGATACCGGTTCGCCGGAGCCTGACTCCGATTTTGGAACTCAGGTATCAGTTGTTTCGAGACTGAAGCATGAACACTTTGTGGAGTTGATTGGATATTGTCTGGAGGCAAACAACAGAATCTTGGTTTATCAATATGCAAGCCATGGTTCTTTGCATGACGTATTACATGGAAGGAAGGGTGTACAAGGGGCTGAACCTGGTCCAGTGTTAAGCTGGAACCAGAGAGCAAAGATTGCATTTGGTGCAGCAAAAGGACTTGAGTATCTTCATGAAAAGGTTCAGCCTTCCGTAGTTCACCGAGATGTTAGATCCAGCAATGTGTTGCTGTTCAATGACTATGAGGCCAAGATTGCTGATTTCAGCTTGACTAATCAGTCTTCTGACACAGCAGCTCGCCTACATTCAACAAGAGTCTTGGGAACATTTGGCTATCACGCTCCAGAGTATGCAATGACTGGGCAGATAACACAGAAAAGCGATGTTTACAGTTTTGGGGTTGTGCTTTTAGAGCTCCTAACAGGAAGAAAGCCAGTAGACCACACAATGCCCAAAGGGCAACAAAGTCTTGTAACTTGGGCAACTCCAAGGTTGAGTGAGGACAAAGTGAAACAATGTGTGGATCCTAAGCTAAACAATGAGTACCCACCAAAGGCAATTGCAAAGTTGGCAGCGGTTGCAGCACTGTGTGTTCAGTATGAAGCAGACTTCAGGCCAAACATGACAATTGTTGTCAAAGCTCTCCAGCCACTTCTCAATTCAAAACCGGGTGGTCCTGAGTCTAATGCTTGA 1137 0.4758 MLCCGGAEEESSGPPANQYTAPPRGGGGGGGGGGNTYGGARGGGGVGNDRGEPRSNVARSGAPQKALPIEIPAIPLDELNRLTGNFGSKAFIGEGSYGRVYFAKLSNGTDAAIKKLDTGSPEPDSDFGTQVSVVSRLKHEHFVELIGYCLEANNRILVYQYASHGSLHDVLHGRKGVQGAEPGPVLSWNQRAKIAFGAAKGLEYLHEKVQPSVVHRDVRSSNVLLFNDYEAKIADFSLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNEYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNSKPGGPESNA* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2347 378 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
Dod01g2347 378 Gene3D Phosphorylase Kinase; domain 1 54 161 - -
Dod01g2347 378 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 377 - -
Dod01g2347 378 ProSitePatterns Tyrosine protein kinases specific active-site signature. 213 225 IPR008266 GO:0004672|GO:0006468
Dod01g2347 378 Gene3D Transferase(Phosphotransferase) domain 1 163 372 - -
Dod01g2347 378 SUPERFAMILY Protein kinase-like (PK-like) 67 363 IPR011009 -
Dod01g2347 378 Pfam Protein tyrosine and serine/threonine kinase 91 363 IPR001245 GO:0004672|GO:0006468
Dod01g2347 378 SMART tyrkin_6 86 363 IPR020635 GO:0004713|GO:0006468
Dod01g2347 378 PANTHER OS03G0226300 PROTEIN 1 377 - -
Dod01g2347 378 ProSiteProfiles Protein kinase domain profile. 86 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2347 378 MobiDBLite consensus disorder prediction 1 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2347 Dod-Chr1 61743518 61746082 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2347 50 370 Receptor kinase-like Gene Family AT3G58690 43.692 1.86e-87 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Dod01g2347 PK_Tyr_Ser-Thr 8.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2347 - - gmx:100786291 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2347 01 61743518 61746082 Dod01g2347 01 61743518 61746082 ECH