Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2330 ATGGAAGAAGCACGAGACTCTTCTTCCCGGAGCTCCCTCAACGGGGATTTCGGGTTCGGTACTGGAACCGACCGAAGATTCGCGTTTTCGCGCCAAGCTTCGTTCCAACAGCAACAGGCTCCGCACACGCCGATTGTCGTTGATTCGGTGATGAGGCCTTTCCTCTCCCGAACCGATTCCACCGTAGACATTCCCAACACTCCGGTGCACCGATACGACAAGCTCCTCGAGTCCACGAAAAGATCGTCGTCGTCGTCGTTCCCTTGGTTCGTTCTTGACGTGTTCCGAAACGCTAGGTCTGGGCATAGGTACATGAAGAGACTCCTTTCTGATGATCTCGTTGAATGTGGCGTACTCTACCACCGAGTTGCTCTTTGGCCTCTTCACTGGCCGTGTAGGTTAGATTGGTGTCTAGATGCCTTTCACTTGACTTTTGGATGTGGACTTTTGACATTTTCGTTATTTGTTATGGCTGCATCTAGGAAGAAACCCGATCGAGAATATACTTATGGATATAAAAGGCTAGAAGTCTTGTCTGCATTTACAAATGCCCTGTTTCTTTTGTTTATGTCATTCTCCCTAGCAGTTGAAGCACTTCATGCATTCATACAAGATGAATCGGAGCACAAGCATTACTTAATTATTTCTGCAGTGACCAATTTAGTTGTGAATCTCATCGGTGTGTGGTTCTTTAGGAACTATGCTCGGGTTAATCTTGCTTACAGAAATGCAGAAGATATGAATCACCATTCAGTTTTCCTGCATGTTCTTGCAGATTCCATTCGCAGTGCAGGTCTTATATTGGCATCTTGGTTATTGTCAATTGGGGTTCAGAATGCAGAAGTCTTGTGTTTGGGACTTGTTTCTGCGGCTGTTTTTATGCTTGTTCTGCCTCTATTTAGGGCAACTGGTGGTATCTTGCTCCAAATGGCACCACCTAGCATCCCAACTACTGCCTTGAGCAAATGCTTGAGACAGATTACTGCTCGGGAGGATGTACTGGAAGTTACCCAGGCTCGTTTTTGGGAATTGGTGCCGGGTCATGTGGTTGGTTCACTCTCAATACAGGTAAAGAAAGGGGTTGATGATCGTCCAATACTTTTATTTGTGCATGGTCTGTACCATGATTTGGGCGTGCAGGACCTCACAGTGCAGACTGATGATGCATGA 1170 0.465 MEEARDSSSRSSLNGDFGFGTGTDRRFAFSRQASFQQQQAPHTPIVVDSVMRPFLSRTDSTVDIPNTPVHRYDKLLESTKRSSSSSFPWFVLDVFRNARSGHRYMKRLLSDDLVECGVLYHRVALWPLHWPCRLDWCLDAFHLTFGCGLLTFSLFVMAASRKKPDREYTYGYKRLEVLSAFTNALFLLFMSFSLAVEALHAFIQDESEHKHYLIISAVTNLVVNLIGVWFFRNYARVNLAYRNAEDMNHHSVFLHVLADSIRSAGLILASWLLSIGVQNAEVLCLGLVSAAVFMLVLPLFRATGGILLQMAPPSIPTTALSKCLRQITAREDVLEVTQARFWELVPGHVVGSLSIQVKKGVDDRPILLFVHGLYHDLGVQDLTVQTDDA* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2330 389 PANTHER - 5 388 IPR045316 GO:0005385|GO:0006829|GO:0006882
Dod01g2330 389 PANTHER METAL TOLERANCE PROTEIN C2 5 388 - -
Dod01g2330 389 SUPERFAMILY Cation efflux protein transmembrane domain-like 139 309 IPR027469 -
Dod01g2330 389 Gene3D Cation efflux protein transmembrane domain 134 307 IPR027469 -
Dod01g2330 389 Pfam Cation efflux family 138 308 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Dod01g2330 389 TIGRFAM CDF: cation diffusion facilitator family transporter 139 362 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2330 Dod-Chr1 61455605 61460159 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2330 139 387 Inorganic Solute Cotransporters AT3G61940 19.636 2.82e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2330 K14692 - gmx:100809496 525.013