Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2326 ATGATGGCATGGATTGCAAAAGTGGCTTCAGCGTGCTGGATGCGCGCGACGTGCAGGGACATACTAGACCTCGACGACAATGACGCTCTCGTGTGGAGCAAGGACCTCGAGAGGCACTCATGCGGTCAATACTCCTTCGCTGTCTGTCAGGCCAATCCGGTCCTCGAGGATTTCAGCCAGGTCGAGACCGGCACCAACGCTATCCTCGTCGGAGTCTACGACGGCCATGGCGGCCACGAAGTCGCCGAGTTCGTCTGTAACAGGCTCTTCAACGAAGTAACCAGACTTGCTCAGACTCAAGGTAATATTTCTCAAGTAACTCTCGGCGGTGCTGTTGCTTACACTGAGAATGAATTCCTGGAGCTTGTTCGAAATAATCAAGGGACCAGGCCAAACATAGCATGCATGGGAACCTGTTGTCTGGTTGGTGTTATATGGAAAGGGACCCTTCTCATTGCCAATCTTGGAGACTCGCGTGCTGTACTTGGTTACACGAATCATCTTAACATGATCACTGCTGAGGCCTTGACCGAAGATCACAATGTTAACAGAGAGGAGATCAGACAACTGCTTAGCCTCACGAATACAGATGATCCAAATCTTGTGATTCATCGTAATGGAGCATATCGTATTAAAGGCATCATCCAGGTTTCCAAGTCCATAGGAGATGCATACATGAAGCATCCTGACTTTGCACCTCATCCATCCTTGGAAAGGTTTCAATTACCTCATCCTATTACGAATCAACCTGCCATATCATCAGAGCCATCTCTATACACAAGAGCTTTACACGTTCGCGATAAGTTCCTCATATTTGCATCCGATGGACTATGGGACTGCTTAACAAATCAAGAAGCTGTTGAGATCGTTAATAAGTACCCGCGTCGGGGGATTGCAAGGAGGCTTATTAAAGCTGCTCAAATAGCGGCAACTAGGAGAGCGAATATACCGTATAAACAACTGCGTGATATTGACAGGGGCACACCTAGGAGGGACATACACGATGATATTACTGTGGTTGTTGTCTACATAAACCATGAGCTTCTCGGGCACAAAATTGACAATACACCCAACATGTCCATCAAAGGCTTCAATGATGTGCCTGGAGAGTCAACTTTTGCAAGTATAAACGGTTTGATGTGA 1143 0.4724 MMAWIAKVASACWMRATCRDILDLDDNDALVWSKDLERHSCGQYSFAVCQANPVLEDFSQVETGTNAILVGVYDGHGGHEVAEFVCNRLFNEVTRLAQTQGNISQVTLGGAVAYTENEFLELVRNNQGTRPNIACMGTCCLVGVIWKGTLLIANLGDSRAVLGYTNHLNMITAEALTEDHNVNREEIRQLLSLTNTDDPNLVIHRNGAYRIKGIIQVSKSIGDAYMKHPDFAPHPSLERFQLPHPITNQPAISSEPSLYTRALHVRDKFLIFASDGLWDCLTNQEAVEIVNKYPRRGIARRLIKAAQIAATRRANIPYKQLRDIDRGTPRRDIHDDITVVVVYINHELLGHKIDNTPNMSIKGFNDVPGESTFASINGLM* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2326 380 CDD PP2Cc 44 344 IPR001932 -
Dod01g2326 380 Pfam Protein phosphatase 2C 66 308 IPR001932 -
Dod01g2326 380 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 7 365 - -
Dod01g2326 380 SMART PP2C_4 28 342 IPR001932 -
Dod01g2326 380 ProSitePatterns PPM-type phosphatase domain signature. 69 77 IPR000222 GO:0043169
Dod01g2326 380 PANTHER ALPHABET, ISOFORM E-RELATED 7 365 - -
Dod01g2326 380 Gene3D - 21 354 IPR036457 -
Dod01g2326 380 SUPERFAMILY PP2C-like 45 345 IPR036457 -
Dod01g2326 380 ProSiteProfiles PPM-type phosphatase domain profile. 43 344 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2326 Dod-Chr1 61431032 61433258 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2326 1 374 PP2C-type Phosphatase Gene Family AT5G06750 50.128 4.89e-129 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2326 K01102 - jre:109011952 406.371