Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2325 ATGTCGTGGCTTCGAAAGATCATGCCATGGCTTGCAAAGATGATGTCGTGGGTTGCAGCGTTCTTTAGTAGGGAGGAGGAGGAGGAGGAGGAGAACATACTAGAGCCGCAGGAAGAACCCGAGGAAGAGGACCCTCTCTTGTGGAGCACGAACCAGAGGCACTCGTGTGGAGAATACTCCTTCGCTGTGTGTCAGGCCAATCATGCCCTCCAGGATTTCAGCCACGTCGAGACTGGCACCAACGCAATCTTCGTCGGTATCTACGACAGCCATGGCGGTCCCCATGCCGCTAACTTCGTCACTGCCAACCTCTTTAGCCAATTGTTAAGGATTGCTCGGGCTCATAATACTATTTCTCCATTAACTCTCGCTGAAGCTGTTGCTTGCACTGAGGCTCATTTTCTGGATCTTGTTCGAGGGCATCACTATTTCAGGCCATACTTGGCATGCTCGGGAACCTGTTGTCTGGTTGGTGTGATATGGAAAGGGACCCTTCTCATTGCCAACCTTGGAGACTCACGTGCTGTGATTGGTTACATGAATCGTCTTAACAAGATCACTGCTGAGCCCTTGACCGAAGATCACAATGTTAACAGAGAGGAGATCAGAAGACAGCTTAGTGTAACACATACAGATGATCCAAATCTTGTGATTCATCGCAATGGAGCATATCGTATTAAAGGCATCATCCAGGTTTCCAGGTCTATAGGAGACGCATATCTGAAGCATAGCGAATTCAGAGTTGATCAGTCATTAGAAAAGTTTCAATTACCTGTGCCTATTAGGACTCAACCTGCCCTATCATCAGACCCAGATATATATCAACGAATCTTACAACCCCAGGACCAGTTCCTTATATTTGCATCTGATGAACTCTGGAATCACTTGACAAACCAGGAAGCTGTTGAGATTGTTTATAAGTACCCGCGAAGGGGAATTGCAAAGAGGCTTGTTGAGGCTGCCCAAAAGGTGGCAGCTGGGAAAGTGGGTTGCCCATATAAAGAACTTCATGATATTCGCAAGGGATTTAGGAGGGAGATACATGATGATATTACTGTGGTTGTTGTCTTCATAGACCATGACCTTCTCGGGATGAAACATCTTATACGGGAAAGCTCCGTCAAAGGGTTCAGTAATGTGGTTGGACCATCAGATTTTCGATATGTAGACGATTTGATGTGA 1182 0.4662 MSWLRKIMPWLAKMMSWVAAFFSREEEEEEENILEPQEEPEEEDPLLWSTNQRHSCGEYSFAVCQANHALQDFSHVETGTNAIFVGIYDSHGGPHAANFVTANLFSQLLRIARAHNTISPLTLAEAVACTEAHFLDLVRGHHYFRPYLACSGTCCLVGVIWKGTLLIANLGDSRAVIGYMNRLNKITAEPLTEDHNVNREEIRRQLSVTHTDDPNLVIHRNGAYRIKGIIQVSRSIGDAYLKHSEFRVDQSLEKFQLPVPIRTQPALSSDPDIYQRILQPQDQFLIFASDELWNHLTNQEAVEIVYKYPRRGIAKRLVEAAQKVAAGKVGCPYKELHDIRKGFRREIHDDITVVVVFIDHDLLGMKHLIRESSVKGFSNVVGPSDFRYVDDLM* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2325 393 SMART PP2C_4 52 356 IPR001932 -
Dod01g2325 393 CDD PP2Cc 59 358 IPR001932 -
Dod01g2325 393 Pfam Protein phosphatase 2C 58 325 IPR001932 -
Dod01g2325 393 PANTHER ALPHABET, ISOFORM E-RELATED 35 378 - -
Dod01g2325 393 Gene3D - 25 366 IPR036457 -
Dod01g2325 393 ProSiteProfiles PPM-type phosphatase domain profile. 55 358 IPR001932 -
Dod01g2325 393 SUPERFAMILY PP2C-like 55 359 IPR036457 -
Dod01g2325 393 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 35 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2325 Dod-Chr1 61421210 61422993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2325 46 386 PP2C-type Phosphatase Gene Family AT5G06750 54.179 1.97e-126 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2325 K01102 - pop:7455644 390.963