Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2323 ATGGGAGTGGACTCACAGAAGAACAGCCTCCGCAGATTGCAGTGTGCCTATGCCTCCATGGATGAAGCTTTTGAAATCGGGAAAGAGACGTATCGAGGGCAGCAATACAGCCAGATATACTTCGCTCGGCTTGATTTGATGCGCACTCTCTTGTATTCCCTCGTCTCCAATTGGAAACCCCATTCTCCAGTGTGCACTGTGTTGGGATTGGAAGAGGGGAAAGAGTGTGTCATTGTTGGAACCCTTTATAAACACATGAAGCTCAAACCTTGCATACTTGATGAGTATTCTAAGGAGAGATCTGCAGTTCCGCTTGTCAGGCCTCATAACTTCATGCACCAGGATGATTATCTAGTTTTGGAGGATGAAAGTGGGAGAGTTAAGCTTGGCGGGGATCTCATTTCGCCTTCTGTGTATGTAACAGGAATTGTGGTTGCTTTACATGGAAAGGAGACAAGTGCAGGTGAATTTTTGGTTCTGGATGTCCTAGAAGCTGGCCTACCACCACAGATAGAATTTCCTCTTAATTCAAGGGAAGACAAATATGTTGTTCTTGTGTCTGGGTTAAGTGTTGGGAGCAGTAACTCTAATCCCCTTCAGTTTCAGCTTCTCATTGATCACATTACTGGGCATTTAGGAGATGAGAAGGAGCAAAGTATTGCATCTCAAATTGTTCATGTGGTCATTGCTGGAAATTCTGTTGAGATACCACGTGGACTTCTTAATGGACAGAATTTGGCTTCAAAGGATCTCTCAAGGATAGCTGAACCAATAAAGGAATTGGATATTATGTTGAATCAGATTTCTGCTGGTTTGCCTTTGGATATAATGCCAGGACCCAATGACCCTGCTAATTTCTCATTACCACAGCAGCCTTTGAATAGATGCCTTTTTCCTGGGTCATCAGCTTATAACACCTTTAGATCTTGTACAAATCCTCATTCTTTTGAGATTGATAATATCAGGTTTCTTGGGACATCAGGTCAGAATGTAGATGATCTTGAGAAGTATTCTGAGGCAAAAGATAAACTTGAATTCATGGAAAGGACACTAAGGTGGAGGCATTTGGCACCCACAGCACCTAATACTCTTGGGTGCTATCCTTATATTGATAGGGATCCCTTCTTCATTGAGAGCTGTCCTCATGTGTATTTTATTGGCAATCAGGATAAATATGAAACTCATGTGATAAAGGGATCAGAAGGGCAGTCGGTAAGACTGCTATGCATTCCAAAATTTAGTGAATCTGGAGTTGCAGTTATGGTAAATTTAAGGGATCTTGAATGCCATGCTCTGAGTTTTGGAACTCGGTTCAGTTCATAA 1323 0.4225 MGVDSQKNSLRRLQCAYASMDEAFEIGKETYRGQQYSQIYFARLDLMRTLLYSLVSNWKPHSPVCTVLGLEEGKECVIVGTLYKHMKLKPCILDEYSKERSAVPLVRPHNFMHQDDYLVLEDESGRVKLGGDLISPSVYVTGIVVALHGKETSAGEFLVLDVLEAGLPPQIEFPLNSREDKYVVLVSGLSVGSSNSNPLQFQLLIDHITGHLGDEKEQSIASQIVHVVIAGNSVEIPRGLLNGQNLASKDLSRIAEPIKELDIMLNQISAGLPLDIMPGPNDPANFSLPQQPLNRCLFPGSSAYNTFRSCTNPHSFEIDNIRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPYIDRDPFFIESCPHVYFIGNQDKYETHVIKGSEGQSVRLLCIPKFSESGVAVMVNLRDLECHALSFGTRFSS* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2323 440 Gene3D - 42 165 - -
Dod01g2323 440 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 6 434 IPR024826 -
Dod01g2323 440 Pfam DNA polymerase delta subunit OB-fold domain 35 162 IPR040663 -
Dod01g2323 440 Gene3D - 174 439 - -
Dod01g2323 440 Pfam DNA polymerase alpha/epsilon subunit B 183 392 IPR007185 GO:0003677|GO:0006260
Dod01g2323 440 CDD MPP_PolD2_C 182 434 IPR041863 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2323 Dod-Chr1 61410576 61417200 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2323 1 439 Core DNA Replication Machinery Family AT2G42120 76.765 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2323 K02328 - gmx:100780072 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2323 01 61410576 61417200 Dod01g2323 01 61410576 61417200 ECH