Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2316 ATGAACGAGAACAAGATTGATTGCCATGGACTTATTCAACAAAGCCATGGACTAAATGGGGATTTCAATTTTGAGTGTGGCAACCGTTCTTGTCAATACTTTGATACTAGACAGGCTTGGAATGTTGGAACTTGCAATCAGCCACTTGCCATGGCTGGAGGAGGAGGATCAGAACAGCCACAACCACACATAGGCCCTGTTAAATCATCTTCTGCCACAATCATGAGCCGTTTCGAGTCGCCAGCTTCTGCTTTTTATGCTGCAGAACTCTGCATGGGGTTTGCAGGATATGATTGCCAAGTTGGTAATAATCACTCTTTGAGCACTCAGTTCTCTAAGGTGAATGACTTGGAATTCCCTTTGTATCAGTCTCCCAGGGAGAACATTTTCGTCGACTCAGCAAACCAACCTGATCCCAACTTTGAGTTAAACACTTTGCAAGCAATGGTGAAATCTCAATTGAATGGAAACAAATGCGGCAGATTCCCTCAAAGATCCAATAAAATCCCATGTGGGAATTTCCCCGGCAGCAAATTCCAGCCAATTGAACAACAAAAGCTGTTCGCTGATGGTGCTGCCTCAGTTAGCATGAGACCATCATTTCCTATTAAGGGAAATCAAGATCATATAGTTGGTTGTGGGTCTTATAACTTGCCTTATGCACAGCTGAGCTTCTCTTCTCATCAAGATAAGTCTCCAACACTTTCAGCAGGAAGTATGTCTTCTACTTCTGGAAACCCTGCATCTAATGGGGCAATGGTCTCAAGTAAAACACGCATAAGATGGACTCAGGATCTTCATGACAAGTTTGTTGAGTGCGTGAATCGCCTTGGGGGTGCTGATAAGGCAACACCAAAAGCTATATTAAAGATGATGGACTCTGATGGATTGACCATCTTCCATATCAAAAGTCATTTGCAGAAATATAGAATTGCAAAATACATGCCAGAATCACCTCAAGGTAAATCTGAAAGAAGAAACCATATAGAGGATGTGCAACATCTTGATGCCAAAACTGGATTTCAAATTAGAGAAGCCCTTCAGTTGCAATTAGATGCTCAAAGGCGTCTTCATGAACAGCTAGAGATTCAGAGAAAGTTACAGTTGCGAATTGAGGAACAAGGTAGGCAGCTGAAAAGGATGTTTGATCAGCAGCAGAAAACAACTAATAGCCTCTTCAATTGCCAGAACACAGTCAATGATGATACAGCAATTAGTCTTCAAGATGTCGGGGTTTCAATTCCTGAAGGGTCTTGA 1257 0.4224 MNENKIDCHGLIQQSHGLNGDFNFECGNRSCQYFDTRQAWNVGTCNQPLAMAGGGGSEQPQPHIGPVKSSSATIMSRFESPASAFYAAELCMGFAGYDCQVGNNHSLSTQFSKVNDLEFPLYQSPRENIFVDSANQPDPNFELNTLQAMVKSQLNGNKCGRFPQRSNKIPCGNFPGSKFQPIEQQKLFADGAASVSMRPSFPIKGNQDHIVGCGSYNLPYAQLSFSSHQDKSPTLSAGSMSSTSGNPASNGAMVSSKTRIRWTQDLHDKFVECVNRLGGADKATPKAILKMMDSDGLTIFHIKSHLQKYRIAKYMPESPQGKSERRNHIEDVQHLDAKTGFQIREALQLQLDAQRRLHEQLEIQRKLQLRIEEQGRQLKRMFDQQQKTTNSLFNCQNTVNDDTAISLQDVGVSIPEGS* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2316 418 SUPERFAMILY Homeodomain-like 255 311 IPR009057 -
Dod01g2316 418 Pfam MYB-CC type transfactor, LHEQLE motif 342 388 IPR025756 -
Dod01g2316 418 Gene3D - 256 315 - -
Dod01g2316 418 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 257 312 IPR006447 GO:0003677
Dod01g2316 418 MobiDBLite consensus disorder prediction 229 256 - -
Dod01g2316 418 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 256 314 IPR017930 -
Dod01g2316 418 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 49 416 - -
Dod01g2316 418 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 49 416 IPR044848 GO:0003700
Dod01g2316 418 Pfam Myb-like DNA-binding domain 261 310 IPR001005 -
Dod01g2316 418 Coils Coil 344 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2316 Dod-Chr1 61271565 61275003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2316 247 387 G2-like Transcription Factor Family AT3G04450 55.172 6.22e-49 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dod01g2316 Myb_DNA-binding 8.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2316 - - gmx:100527766 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2316 01 61271565 61275003 Dod01g2316 01 61271565 61275003 ECH