Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2313 ATGATCCATTGTCGAAAACTTCAATTAACACTCTTATTTTCCAAAATCTTCCAAACCCACCTTAAACCCTTGCAAAACCCTAGATTCCACAGCACCAAAATTGCACCTCAATCGACACCAAAACACTGCGATTCCAAGCTCCCCAGAAAGGCCAGAACAGAAGTACAAGCCGCATTGCTCGAATACCTTCACTCCACGAGGAGCTTGCAGTTCTTGGACGCAGACAACATGTGCAAAAACTCGCCTATTTTCCTTCACGACCTTCTCAGTAATGTTCAGAAGAATAACAATAATCTCGATGATTGTGGTTGTGACATCAAGAAATCGACTTCGCGTTACTTGCGTTACCACCCCATCAACGAGTTTGAGCCTTTCTTCGAGAGCACGGGTTTGAAGCCTTTTGAGTACTCACACCTTCTTCCTAGGGACATGATCTTCTTGAACGATGACACGCTCTTGATGGAGAATTACCACACTCTTTGTAATTACGGTGTTCCCAGGAATAAGATAGGGAAGATATTCAAGGATGCACCTGAGATTTTCCGTTATGAGCGTGGGGTCTTGTGTTCCAAGCTTAAGTGTTATGAGGAGCTTGGTGTTGGTTCTTCTACTTTGGTGAAGGTTGTTGTTTTGAGCCCAAGGGTTTTGGTTGGGGATGTTGACCTTTGTTTTGTTAAGGTTGTTGTGAAGTTGAGGAATCTTCTTGTTGAGAAAAAGGGTAATGGTTGGATTGAGGGAAATTTGTTGGATGAAAGTTGTTGTAACTGGGGGGTTATGCTTGAGCTCTTGCGCTTGCTTGAGAAGGTTTACAGAGAGGAACAAGTGTTGGGTGAGATGATTGGCCAGCACCCTTGTGTTGTTTTTGAGGATTCTGGGAGTAGTACATTGTCCCTAATTGGGTTCTTGTTGAAGTTCGGGTTGTCCGTGGACCAGATATGTCTCATGTTTGTGGAGCTTCCACGGATTGGGGTTGTGAAATTCTTGTCGAATTTGAGGCAGGCTTTTATGTTCCTCTGTGATATCGAGATGCAGGCTGTGGAGATCGGGAAGATTTTTCGGTCTCAATCCTTGTTGATGGGCTCTTCCAAGCTCAAGAAAACTAACAGTTTGCTCGGTAACTTGAATATTGGGAAGAAAAGGCTGTGTAAGTTTGTGCAGGATAATCCGGAAGAAATGAAGAATTGGGTTCTGGGGAAGAAAATTCAGCCTTTGGTGTACTCTGATGAGGAGAAGAAATTGAAGAAGCTGAAGACAGAATTCTTGATAAACTTGGGGTATGAAGAGAACTCGGAGAAAATGGAAGAGGCGTTTAAGCTGTTCAGAGGAAAGGGAGATGAGCTTCAGGAGAGATTCGATTTTATCGTTAAAGCTGGCTTGGATATTGAGGATGTTCGCAGAATGATTAGAGTTGCACCTCAGATTCTTAATCAGAACACAGATAGGATCAATAGGAAAATTGAATACCTTGTGAATGAAGGTTATCCGATATCAGCGTTAGTGAATTTCCCATCTTTTCTTTCCTATACACCTGGTAGAGTTAAGCTTAGGTTATCAATGTATAATTGGCTCAAAGACAATGGAGCAGCAGATCCCGGGCTTGCTTTGAGCACTGTAATTGCATGCTCGGAGAAAATATTCATACAGCAGTATGTAAATCGCCATCCTTCTGGTCCTCAAGTATGGCAGGATTTAAAGTCAGAAATTTGTTCTGAGAATTCATAA 1722 0.4257 MIHCRKLQLTLLFSKIFQTHLKPLQNPRFHSTKIAPQSTPKHCDSKLPRKARTEVQAALLEYLHSTRSLQFLDADNMCKNSPIFLHDLLSNVQKNNNNLDDCGCDIKKSTSRYLRYHPINEFEPFFESTGLKPFEYSHLLPRDMIFLNDDTLLMENYHTLCNYGVPRNKIGKIFKDAPEIFRYERGVLCSKLKCYEELGVGSSTLVKVVVLSPRVLVGDVDLCFVKVVVKLRNLLVEKKGNGWIEGNLLDESCCNWGVMLELLRLLEKVYREEQVLGEMIGQHPCVVFEDSGSSTLSLIGFLLKFGLSVDQICLMFVELPRIGVVKFLSNLRQAFMFLCDIEMQAVEIGKIFRSQSLLMGSSKLKKTNSLLGNLNIGKKRLCKFVQDNPEEMKNWVLGKKIQPLVYSDEEKKLKKLKTEFLINLGYEENSEKMEEAFKLFRGKGDELQERFDFIVKAGLDIEDVRRMIRVAPQILNQNTDRINRKIEYLVNEGYPISALVNFPSFLSYTPGRVKLRLSMYNWLKDNGAADPGLALSTVIACSEKIFIQQYVNRHPSGPQVWQDLKSEICSENS* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2313 573 Pfam mTERF 264 392 IPR003690 GO:0003690|GO:0006355
Dod01g2313 573 Pfam mTERF 405 546 IPR003690 GO:0003690|GO:0006355
Dod01g2313 573 SMART mt_12 398 427 IPR003690 GO:0003690|GO:0006355
Dod01g2313 573 SMART mt_12 496 529 IPR003690 GO:0003690|GO:0006355
Dod01g2313 573 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Dod01g2313 573 SMART mt_12 171 201 IPR003690 GO:0003690|GO:0006355
Dod01g2313 573 SMART mt_12 465 495 IPR003690 GO:0003690|GO:0006355
Dod01g2313 573 PANTHER CGI-12 PROTEIN-RELATED 38 565 IPR003690 GO:0003690|GO:0006355
Dod01g2313 573 Gene3D Transcription termination factor 3, mitochondrial 261 563 IPR038538 -
Dod01g2313 573 Gene3D Transcription termination factor 3, mitochondrial 117 239 IPR038538 -
Dod01g2313 573 PANTHER MITOCHODRIAL TRANSCRIPTION TERMINATION FACTOR-RELATED 38 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2313 Dod-Chr1 61247538 61250489 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dod01g2313 mTERF 3.8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2313 - - lja:Lj1g3v4317450.1 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2313 01 61247538 61250489 Dod01g2313 01 61247538 61250489 ECH