Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2310 ATGATTTGCGACTACCTCTACGTGCATCTCAACCTCGTTGTCTTCTCGTCAATTTTGATGTCTCAGGTTTTCGCTTTTACTCCTCCAACCGAAGTGTTAGCTCTTCAGGATCTATACAAGGCCTTAAACTACCCACCTGTGCTCCAGGGATGGAATGGCAGTGATCCTTGTGACGAGTCTTGGACAGGAATAGCTTGTTCTGGGTCATCATCAGTTATACACCTCAAAATTCACGGATTAAACCTCTCGGGATATCTTGGAACCATGCTCCATAATCTACAGAACTTGAAGGAACTTTTTATAAATGGCTCTGAACTCATTGTTATCTTCTTGCCTTGCAGGAATTTAAGCCACAATTCCTTAAATGGACCCATTGGCGATGTATTTACTGGCCTAGATAATCTCAAAGAAATGGACCTTTCATACAATAATTTCTCGGGAGATCTTCCATGGTCATTTGGTTCCTTGAAAAACCTTGCTAGATTGTTCTTGCAGAATAACAGATTCACTGGATCAGTAGCCTACTTGGCCCAACTTCCACTTACAGATTTGTATGTTATCCTTAACATTTTCCCAAAATATATTTACAGTCCTATTATTTCCTCATTTCTCTATGCTCCCAGGAACATTCAAGACAACCTGTTTAGTGGCATTCTTCCACAGCACTTTCAGTCCATACAGAATTTATGGATTGGAGGGAATAAATTTCATGCAGTGGATGGCTCTCCTCCCTGGAATTTTCCATTGGACACGGTACCAGTTAAGCATAATATCAGTCACCCACCAACTACTCAGGCAAGTGCCATCAAGAACTATTCTCCTCCTCCTCCCGACAAAGTAAGTCAACACAAGAAGATGAAACATATGGGTCCAGGAGGAATAGCTTTTATGGTTGGTGGAATAACACTAATGGCAACATGCATGGCACTCTTTGTTGCAATCCGTTTGACTAAACTGCGTGCACAGAGGCTGAACTTGAAGAGCTTGTCCAGCAACCATGACTCTTCGCATTCTCATCCAACCAGTGCAACCATAGAGGTCTCTTCTACTGCATTAGATGAGAGCCCACAAATCCCACCTTTTAATTCTGCATCCCTTTTGGGTCCATTGCCTTCCGTGCACCATAACAATGCAGATGAAGCTTCAAGAAGAAGCTTCTCCAGGAGAAGCCGATCCACCGGAAGGATGAAAGTTTACACCGTAGCTGAGCTTCAGTTGGCTACCAACGGCTTCAGTGAATGTAACATACTGGGAGAGGGATCTCTTGGCAGTGTTTACAGAGCAAAATTCCCGGATGGCAAAATTTTGGCCGTGAAGAGTATAAACCTGGCGGGTCTGTCTTTCAGAGAAGAGGAAAAGTTCTTGGATGTGATTTGCACGGCTTCCCGATTGAAGCACCCCAACATCGTAGCACTTAATGGCTACTGTTTGGAGCGCGGAAAGCATCTTCTTGTCTATGATTGTGTTAGAAATTTAACTCTACACGATGCTCTTCACAGTGATGTTTACAAACCTTTATCGTGGGTACTCCGTCTCCGGATTGCTGTTGGTGTTGCTCATGCTCTGAACTATTTGCACTCAGCGTTCTCCCCTCCTGTCTCCCACGGCAACTTGAAGGCTGCCAATGTTCTACTCGACGAAAATTTGATGCCTCGTGTTTCTGACTGTGGCTTGGCTCTTTTGAGACCACGGAGGACCCACCAACAGGCTACCGAGATTCCTATTTCAGAGATAGGCTACATGTCACCTGAGCATGGCCGGCCAGGAAGTAGCATCAGAAAGAGAGACGTCTTTGCCTTTGGGGTATTGCTTCTGGAGCTGTTAACAGGAAGGAAACCTTTCGATGGTTCCAGGCCAATAGAGGAGCAATATCTAGTAAAATGGGCTTCATCCAGGCTTCATGATAGCTCAAGTTTGGAACAGATGGTGGATCCCCGTATGAAAAGGACGTTTTCATCCAAGGCTCTTTGTCGTTTTGCTGCTATCATCTCCCTCTGCATACAGCCTTCAAGGCATTTCCGTCCTCAAATGTCTGAAGTTGTGGACTCGCTTGTATCTTTTTCGCAAAAGTTCAACATAGCAAAGAGCAGTGTAGTGGTAGATGGCAGTGAACTTGAATCATTTGAGAGGTCTTTCAGTTCAACCAACACACGCTTTATGGTTTCACCGGCATTGAGCCATGTATCCGCCTGA 2193 0.4469 MICDYLYVHLNLVVFSSILMSQVFAFTPPTEVLALQDLYKALNYPPVLQGWNGSDPCDESWTGIACSGSSSVIHLKIHGLNLSGYLGTMLHNLQNLKELFINGSELIVIFLPCRNLSHNSLNGPIGDVFTGLDNLKEMDLSYNNFSGDLPWSFGSLKNLARLFLQNNRFTGSVAYLAQLPLTDLYVILNIFPKYIYSPIISSFLYAPRNIQDNLFSGILPQHFQSIQNLWIGGNKFHAVDGSPPWNFPLDTVPVKHNISHPPTTQASAIKNYSPPPPDKVSQHKKMKHMGPGGIAFMVGGITLMATCMALFVAIRLTKLRAQRLNLKSLSSNHDSSHSHPTSATIEVSSTALDESPQIPPFNSASLLGPLPSVHHNNADEASRRSFSRRSRSTGRMKVYTVAELQLATNGFSECNILGEGSLGSVYRAKFPDGKILAVKSINLAGLSFREEEKFLDVICTASRLKHPNIVALNGYCLERGKHLLVYDCVRNLTLHDALHSDVYKPLSWVLRLRIAVGVAHALNYLHSAFSPPVSHGNLKAANVLLDENLMPRVSDCGLALLRPRRTHQQATEIPISEIGYMSPEHGRPGSSIRKRDVFAFGVLLLELLTGRKPFDGSRPIEEQYLVKWASSRLHDSSSLEQMVDPRMKRTFSSKALCRFAAIISLCIQPSRHFRPQMSEVVDSLVSFSQKFNIAKSSVVVDGSELESFERSFSSTNTRFMVSPALSHVSA* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2310 730 Gene3D Ribonuclease Inhibitor 28 261 IPR032675 -
Dod01g2310 730 ProSiteProfiles Protein kinase domain profile. 411 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2310 730 MobiDBLite consensus disorder prediction 330 354 - -
Dod01g2310 730 SUPERFAMILY Protein kinase-like (PK-like) 385 684 IPR011009 -
Dod01g2310 730 Gene3D Phosphorylase Kinase; domain 1 372 487 - -
Dod01g2310 730 Pfam Leucine rich repeat 115 169 IPR001611 GO:0005515
Dod01g2310 730 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Dod01g2310 730 Pfam Protein tyrosine and serine/threonine kinase 415 684 IPR001245 GO:0004672|GO:0006468
Dod01g2310 730 PANTHER STRUBBELIG-RECEPTOR FAMILY PROTEIN 2 730 - -
Dod01g2310 730 MobiDBLite consensus disorder prediction 262 286 - -
Dod01g2310 730 PANTHER OS01G0253100 PROTEIN 2 730 IPR045271 GO:0004714|GO:0006468
Dod01g2310 730 SUPERFAMILY L domain-like 28 238 - -
Dod01g2310 730 Gene3D Transferase(Phosphotransferase) domain 1 490 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2310 Dod-Chr1 61226947 61231692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2310 10 730 Strubbelig Receptor Gene Family AT5G06820 48.947 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Dod01g2310 PK_Tyr_Ser-Thr 4.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2310 - - gmx:100775254 934.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2310 01 61226947 61231692 Dod01g2310 01 61226947 61231692 ECH