Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2302 ATGGGGCTTATGAGAGCATTTTTGGGAGAGCAAGAACAAGGGATCACAAAGCTTTTAGATTATTCCTCATCACTGAGCATGGCTTCCAGTAGTGTTAAGATCACAAACCCAACAACCACTCAACTGGAACCACTCCCACCACCTCAACAACACCGTCATCATCAACAACATCATCAGCATCACCACTTTCATCATCAACAACAACAACAACAACATCATCATCAAATTCAAGACAACCAAATTTCTTTTGGGATGATGCAATCTTCTTCATCGTCCTCTATCCCCGGAAACTACTTAAACAAGGACTCTGGAGCTTATGACTTGGGGGAATTGGACCAAGCCCTTTTTCTCTATCTCGATGGACAAACAGACCCCTCAGGTGTTCAAGAACAAAGACAGAACTCGTCATCATCACATATGAGGCCTCCAACTCTTAACATTTTCCCGTCTCAGCCTATGCACGTAGAGCCATCATCATCCAATTCCAAGGCTAGCATGGATTTGGTTTCTCCACAAACCAGTGGTTCCAAGAAACCATCAGAGCCGTCCATGGAGTTGGCCAACCCAAGAAACGAAGCCGCTTCTGCCCCTGAACCACCCAAAGCTGTCAAGCGAGAGAGCAATCGCAAGGGTCCAACTTCAAGCTCTGAACAAGAAGGACCCAAAACACCAGATCCCAAGACACTGAGAAGACTTGCTCAGAATAGAGAGGCAGCTAGGAAAAGCAGGCTTAGGAAAAAGGCATATGTTCAGCAGCTAGAGTCCAGTAGGATTAGGCTTAATCAGCTGGAACAAGAGCTACAGCGTGCCAGAGCTCAAGGCATATTTTTTGGTGGAGGTGCACTTTTGGGAGGAGAACAAGGCCTTCCTGTCGCTATTAATGCCATTAGCTCAGAGGCTGCAATGTTTGACGTGGAGTATGCTAGATGGCTAGAGGAGCACCACCGCATAGCGTGCGAGCTAAGAGCTGCAGTGCAAGAGCACCTTCCTGAGAACGAGCTTCGACTTTTTGTGGACAATTGCTTGGCACATTATGACCAAGTGATGAACCTCAAGAGTTTAGTCGCAAAAACAGACGTGTTCCATCTTGTTTCTGGCATGTGGAAGACCCCAGCTGAGCGTTGCTTCATGTGGATCGGTGGATTCAGGCCATCAGAACTCATTAAGATTATTGTGAGTCAAATTGAGCCTCTGACGGAGCAACAAATACTGGGCGTATGTGGCTTGCAACAATCTACGCAAGAAGCAGAAGAGACTCTCTCCCAAGGGCTTGAGGCTTTCAATCAATCTCTCTTGGACACTATCACATCAGACTCTTTGAGCTCTCCTCCCGTTATGGCTAACTACATGGGACAGATGGCCGTGGCCATGAACAAGCTCTCAACTCTTGAAGGTTTCGTCAAACAGGCAGATGGTCTGCGGCAGCAAACGGTTCACCGTCTGCATCAGATCCTCACGACGCGTCAATCAGCTCGGTGTTTTCTGGCAATAGCGGAGTACTTCCATCGCCTGCGAGCCCTGAGTTCTCTGTGGTTGGCACGCCCTCGCCAAGAATAG 1557 0.4798 MGLMRAFLGEQEQGITKLLDYSSSLSMASSSVKITNPTTTQLEPLPPPQQHRHHQQHHQHHHFHHQQQQQQHHHQIQDNQISFGMMQSSSSSSIPGNYLNKDSGAYDLGELDQALFLYLDGQTDPSGVQEQRQNSSSSHMRPPTLNIFPSQPMHVEPSSSNSKASMDLVSPQTSGSKKPSEPSMELANPRNEAASAPEPPKAVKRESNRKGPTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLNQLEQELQRARAQGIFFGGGALLGGEQGLPVAINAISSEAAMFDVEYARWLEEHHRIACELRAAVQEHLPENELRLFVDNCLAHYDQVMNLKSLVAKTDVFHLVSGMWKTPAERCFMWIGGFRPSELIKIIVSQIEPLTEQQILGVCGLQQSTQEAEETLSQGLEAFNQSLLDTITSDSLSSPPVMANYMGQMAVAMNKLSTLEGFVKQADGLRQQTVHRLHQILTTRQSARCFLAIAEYFHRLRALSSLWLARPRQE* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2302 518 MobiDBLite consensus disorder prediction 37 76 - -
Dod01g2302 518 PANTHER TRANSCRIPTION FACTOR TGA9 110 517 - -
Dod01g2302 518 MobiDBLite consensus disorder prediction 51 69 - -
Dod01g2302 518 SUPERFAMILY Leucine zipper domain 227 269 IPR046347 GO:0003700|GO:0006355
Dod01g2302 518 ProSiteProfiles DOG1 domain profile. 300 514 IPR025422 GO:0006351|GO:0043565
Dod01g2302 518 MobiDBLite consensus disorder prediction 123 230 - -
Dod01g2302 518 Coils Coil 246 273 - -
Dod01g2302 518 SMART brlzneu 223 296 IPR004827 GO:0003700|GO:0006355
Dod01g2302 518 Pfam bZIP transcription factor 227 260 IPR004827 GO:0003700|GO:0006355
Dod01g2302 518 Gene3D - 226 275 - -
Dod01g2302 518 Pfam Seed dormancy control 319 393 IPR025422 GO:0006351|GO:0043565
Dod01g2302 518 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 230 245 IPR004827 GO:0003700|GO:0006355
Dod01g2302 518 MobiDBLite consensus disorder prediction 124 181 - -
Dod01g2302 518 CDD bZIP_HBP1b-like 227 276 - -
Dod01g2302 518 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 110 517 - -
Dod01g2302 518 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 225 269 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2302 Dod-Chr1 61050935 61058034 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2302 61 518 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 60.543 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod01g2302 DOG1 1.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2302 K14431 - gmx:100815176 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2302 01 61050935 61058034 Dod01g2302 01 61050935 61058034 ECH