Home
Resource
Genome
JBrowse
Transcriptome
Metabolomics
Pan-genome
External database links
Search
Annotation
Pathway
Duplication type
Transposable elements
Regulatory proteins (RPs)
N6-methyladenosine (m6A)
Browse
Syn-based OGs
Gene-families
Synteny
Syn-Blocks
Syn-Dotplots
Deco-Alignments
Pvu_syntenic
Vvi_syntenic
WGDs- Genes
Anc-Genome
Anc-Reference
Tools
All tools
Genome browsing and annotation
Jbrowse
ShinyCircos
Interproscan
iTAK
Dupgen finder
Homology search and alignment
Bl-match
Seq-fatch
Blast
Diamond
Bi-visualazition
Synteny inference
MCScanX
ColinearScan
Synviso
Syn-blocks-stat
B-Dotter
BB-Dotter
BK-Dotter
Evaluation of nucleotide mutation
ParaAT
KaKs calculator
NG-KaKs-Cal
Paleogenome fractionation
Paleo-gene identifier
Syn-deco generator
Paleo-gene_RI
Paleo-gene_RII
P-index-calculator
Multi-syn-phytre
Gene structure and evolution
Codonw
Cpgfinder
MEME
GSDS
Hmmer
Pfam
FastTree
IQ-Tree2
Multigene-align
Heatmap
Lollipop
Gmapping
GF-Circos
Other auxiliary tools
GC-calculator
Seqlenth-calculator
Genstr-counter
Gam-Calculator
SAF-converter
BDI-finder
BDI-deduplicator
BDI-extractor
BDI-combiner
Seq-corrector
Subtree-splitter
Sptaxon-accessor
SS-extractor
WinO-WGDI
Block_run
KaKs calculate
Blast dotplot
Ks dotplot
Block_info
Correspondence
Statistics
Overview
Phylogenetic tree
Identification of polyploidy
Bar chart
Heatmap
Gene function annotation
Functional genes
Transcription factor
N6-methyladenosine(m6A)
Bar chart
Heatmap
Transposable elements
Documentation
Platform Manual
Pipeline flow examples
L-Wikipedia
Species introduce
Literatures
Common pests
Diseases
Economic value
Planting methods
About
Submission
Community
Contact
Gene search
Sequence information
Show
10
25
50
100
entries
Search:
Select
Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Dod01g2299
ATGGCGTACGCAGCTATGAAGCCCACCAAACCCGGCCTGGAGGAGCCCCAGGAGCAGATCCACAAGATCAGGATCACCCTCTCCTCCAAGCACGTCAAGAATCTCGAGAAGGTTTGCTCCGACTTGGTTCGCGGTGCCAAGGACAAGCGGCTCAGGGTGAAGGGACCAGTGAGGATGCCCACTAAGGTTCTTCACATCACCACCAGGAAGTCCCCTTGTGGTGAAGGTACCAACACCTGGGATAGATTTGAACTTCGTGTGCACAAGAGGGTCATCGACCTATACAGTTCCCCAGATGTGGTTAAGCAGATTACCTCAATCACGATCGAACCTGGTGTTGAGGTTGAGGTGACAATTGCAGATGCTTGA
369
0.5339
MAYAAMKPTKPGLEEPQEQIHKIRITLSSKHVKNLEKVCSDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA*
123
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Annotation information
Show
10
25
50
100
entries
Search:
Select
Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Dod01g2299
122
Pfam
Ribosomal protein S10p/S20e
24
118
IPR027486
-
Dod01g2299
122
ProSitePatterns
Ribosomal protein S10 signature.
46
61
IPR018268
GO:0003723|GO:0003735|GO:0005840|GO:0006412
Dod01g2299
122
SMART
Ribosomal_S10_2
24
118
IPR027486
-
Dod01g2299
122
PANTHER
RIBOSOMAL PROTEIN S10-RELATED
1
121
-
-
Dod01g2299
122
TIGRFAM
uS10_euk_arch: ribosomal protein uS10
21
119
IPR005729
GO:0003735|GO:0006412|GO:0015935
Dod01g2299
122
Hamap
30S ribosomal protein S10 [rpsJ].
20
119
IPR001848
GO:0003735|GO:0005840|GO:0006412
Dod01g2299
122
PANTHER
30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER
1
121
IPR001848
GO:0003735|GO:0005840|GO:0006412
Dod01g2299
122
SUPERFAMILY
Ribosomal protein S10
22
119
IPR036838
-
Dod01g2299
122
Gene3D
Ribosomal protein S10 domain
6
121
IPR036838
-
Dod01g2299
122
PRINTS
Ribosomal protein S10 family signature
79
93
IPR001848
GO:0003735|GO:0005840|GO:0006412
Showing 1 to 10 of 12 entries
Previous
1
2
Next
Select All
Download Selected Rows
Duplication type information
Show
10
25
50
100
entries
Search:
Select
Gene
Chromosome
Start
End
Duplicated_type
Dod01g2299
Dod-Chr1
61020369
61022714
Dispersed
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Functional genes information
Show
10
25
50
100
entries
Search:
Select
Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Dod01g2299
1
122
Cytoplasmic Ribosomal Protein Gene Family
AT3G47370
90.984
2.63e-79
227
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Pathway information
Show
10
25
50
100
entries
Search:
Select
Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Dod01g2299
K02969
-
cpap:110823078
242.662
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows