Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2289 ATGGGGAACAGGAAGTTTGGGAATGAGGTTATTGGTGGTGGTGGTGGTGGTAGTATTGGTGGAGGAGAAGGGGAAGGGCAGCAAGGTAAATTCGTGCTGGTTGACGAAGGGTTTAACTTGGAGTTGGAAGACTTGTTGAGGGCTTCTGCTTATGTTGTTGGGAAGAGCAGGAGCGGGATCGTGTACAAGGTTGTCGGAGTCGGGAGAGGGGGGTCGTCCGCGCCGCCGCCCGCGGCCAACGTGGTGGCCGTCCGGAGACTCAGCGAGGGCGATGCCACGTGGCGGCTCAAGGAGTTCGAGTCCGAGATGGAGGCCATTGCGAAGGTTCGCCATCCAAATGTTGTCCCCTTGAGGGCTTATTACTTCGCAAATGATGAGAAGCTTCTCATCACTGACTTCATCCGCAATGGAAGCCTCCACGCCGCGTTGCACGGTGGGCCTTCCAATTCACTGCCACCATTATCATGGACAGCGAGGTTGAAAATTGCTCAAGAAGCAGCAAGGGGCTTGATGTACATACACGAGTTCGGTGGTCGTAAATATGTCCATGGCAACTTAAAATCAACGAAAATCTTACTGGATGATGATCTCCACCCTTACATATCAGGTTTCGGACTAACCCGTCTTGGTTTGGGTACCGCAAAGTCTACCACATTGGTGCCAAAACGGCAGAATTCAAACCAGACTACAGTAACTTCTGCAGTGAGTTCAAAGGTTGTAGCTTCCTCTAACAACTACCTGGCACCCGAGGTGCGCATTGCTGGTGGCAAGTTCTCTCAGAAATGCGATGTGTATTCTTTCGGTATAGTTCTGTTAGAACTTTTGACTGGTAAGCTTCCCAGTTACGGACCGGAAAATGATGAGAAGGTGCCTAGAGAGTTTTGTGAGGAAAGCATTCAGGGAGGAGCGGCCCTTGTCTGA 921 0.5136 MGNRKFGNEVIGGGGGGSIGGGEGEGQQGKFVLVDEGFNLELEDLLRASAYVVGKSRSGIVYKVVGVGRGGSSAPPPAANVVAVRRLSEGDATWRLKEFESEMEAIAKVRHPNVVPLRAYYFANDEKLLITDFIRNGSLHAALHGGPSNSLPPLSWTARLKIAQEAARGLMYIHEFGGRKYVHGNLKSTKILLDDDLHPYISGFGLTRLGLGTAKSTTLVPKRQNSNQTTVTSAVSSKVVASSNNYLAPEVRIAGGKFSQKCDVYSFGIVLLELLTGKLPSYGPENDEKVPREFCEESIQGGAALV* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2289 306 Gene3D Phosphorylase Kinase; domain 1 31 133 - -
Dod01g2289 306 Pfam Protein tyrosine and serine/threonine kinase 78 288 IPR001245 GO:0004672|GO:0006468
Dod01g2289 306 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 23 295 - -
Dod01g2289 306 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 23 295 - -
Dod01g2289 306 ProSiteProfiles Protein kinase domain profile. 47 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2289 306 SUPERFAMILY Protein kinase-like (PK-like) 52 288 IPR011009 -
Dod01g2289 306 Gene3D Transferase(Phosphotransferase) domain 1 134 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2289 Dod-Chr1 60819986 60822130 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2289 21 287 Receptor kinase-like Gene Family AT3G57830 65.314 1.40e-116 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod01g2289 PK_Tyr_Ser-Thr 6.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2289 - - adu:107492920 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2289 01 60819986 60822130 Dod01g2289 01 60819986 60822130 ECH