Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2282 ATGGCTAAATTCTGTACATACCTGTTCCTTGTTCTCTCTGTGACTTTTACACTGCTAAAGCTTAGTTCAGCTGCATCATCAGAGGCTGATACCCTTCTCTCCTTCAAGGCCTCCATTGAAGACTCCAAGAAGGCCTTGTCAAGCTGGTCAAACACTTCAGCAACTCACTACTGTAACTGGACTGGAATCTCTTGTTCCACCACCACAACAAAAACTTCTTCACCCTCAGTTACTTCCATCAATCTTCAAGGCCTCAACCTTTCTGGTGATATCTCATCTTCTATATGTGACCTTCCAAGTTTGTCTTACCTCAACCTTGCAGACAACATCTTCAACCAGCCCATCCCTCTCCATCTTGCTCAGTGCAGCTTATTGGAGACTTTGAACATCAGCAACAATCTCATATGGGGCACTATCCCATCCCAGATTTCTCAGTTTGCTTCACTGAGAGTTCTTGACTTCAGCAGAAACCACATAGAAGGAAACATCCCAGAAACCTTAGGCTCCTTGAAGAACCTCCAAGTCCTTAACATGGGGAGCAACTTGCTCTCAGGTAGTGTTCCTGCTGTGTTTGGAAACTTGACTAAGCTTGAAGTTCTTGATTTGTCTCAGAATCCATACTTGGTGAGTGAGATTCCAGATGATATTGGTGAACTTGGGAATCTGAAGCAGCTTATGTTGCAGAGCTCTTCTTTCCAAGGTGAAATTCCAGCTTCTTTTGTGGGGTTGGTTAGCTTGACCCATTTGGATCTCTCTGAGAACAACCTTACACGTGGGGTTCCTCAGGCACTGGCTTCTGCTCTCAAGAACCTGGTTTCCTTTGATGTCTCACAGAACAAGCTTCGGGGGCCATTCCCAAATGGTGTTTGCAAAGGGCAGGGCCTAATAAATCTCAGCCTGCACACAAATGGCTTCACAGGCTCAATACCAAACTCCATTGGTGAATGCAAGAGTCTTGAGAGGTTCCAAGTCCAGAACAACGGTTTCTCTGGAGACTTCCCTGCTGCACTGTGGTCATTACCCAAAGTCAAGCTCATTAGAGCTGAAAACAACAGATTATCAGGTCAAATACCTGAGTCAATATCAGGAGCTGTTCAGTTGGAGCAAGTCCAGCTTGACAACAACAGCTTTTCTGGCAAATTCCCTCAAGGTCTTGGCCTTGTCAAGAGCTTATACAGATTCTCAGCATCACTCAACCATTTCTATGGTGAGCTTCCCCCAAATTTTTGTGACTCGCCACTTATGAGCATAGTGAATTTCTCCCACAATTCTCTTTCTGGTCAAATCCCAGAGCTGAAAAAATGCAGGAAACTAGTCTCATTGTCTTTGGCTGACAACAGTCTAACAGGAGAAATACCGTCTTCCCTTGCTGAGCTGCCAGTGCTGACTTACATTGACCTCTCGGATAACAACCTCACTGGTCCAATCCCACAAGGGCTTCAAAACCTGAAGCTTGCTCTTTTCAATGTATCCTTCAATCATCTATCTGGTAAAGTGCCATACTCCTTGATTTCTGGTCTCCCTGCCTCTTATTTGGAAGGGAACCCTGACCTTTGTGGCCCTGGATTGCCCAATTCCTGTTCTGATGACATTCCAAAGCACCCTAATGGTGGCCTTACAACCTTAACATTTGCCTTGATCTCTTTAGCCTTTGTTGCTGGAACTGCCATTCTTGCTGGTGGGTTTGTGTTGTATAGGAGATCATGCAAGGGGAATGAAGTAGGGGTTTGGAGGTCAGTGTTCTTCTATCCTCTCAGGATCACTGAGCATGATCTCCTCATAGGGATCAATGAGAAGAGCTCATTGGGGAATAGTGGAGTTTTTGGCAAAGTTTATGTTATGAACCTACCTGGTGGTGAACTAGTTGCTGTGAAGAAGCTAGTTAATTTTGGAAACCAATCCTCAAAGAGTTTGAAAGCTGAGGTTAAGACTTTGGCAAAGATTAGGCACAAGAACATTGTTAAGATTCTGGGGTTCTGCCATTCTGATGAGTCTGTTTTTCTCATCTATGAATACTTACATGAAGGAAGTTTAGGGGACTTGATTTCAAGCCAGAATTTTGAGTTGCAGTGGGGTGTTAGATTGAAGATTGCCATTGGAGTTGCTCAAGGACTTGCATACCTTCACAAGGACTATGTCCCTCACTTGCTTCACAGAAATGTCAAGTCAAATAACATTCTGTTGGATGCAAACTTTGAGCCAAAGCTCACAGATTTTGCTCTTGATAGGGTGCTTGGAGAAGCTGCATTCCAGTCAACTCTGGATTCTGAAGCACCATCTTCCTGTTATACTGCACCAGAATATGGTTACAGCAAGAAAGCTACTGAACAATTGGATGTCTACAGCTTTGGTGTTGTACTGCTTGAGCTAGTGAGTGGCAGGAAAGCTGAGCAAGCAGAGCCAAGTGAGTCCCTTGACATAGTGAAGTGGGTTAGGAGGAAAGTGAACATCACCAATGGGGTACCCCAAGTCCTTGACCCTAGAATATCACATACATGTCACCAAGGAATGGCTGGAGCATTGGATATTGCTCTTAGATGCACTTCTGTGGTGCCTGAGAAGAGGCCATCAATGGTAGAAGTTCTGAAAAGTCTTCAGTCCCTTGAGTCAAGGACTTGCATTGCAAACTTGCAGGGAGCCAATGAGGAACCCTCCATTCCAGTATGA 2667 0.4469 MAKFCTYLFLVLSVTFTLLKLSSAASSEADTLLSFKASIEDSKKALSSWSNTSATHYCNWTGISCSTTTTKTSSPSVTSINLQGLNLSGDISSSICDLPSLSYLNLADNIFNQPIPLHLAQCSLLETLNISNNLIWGTIPSQISQFASLRVLDFSRNHIEGNIPETLGSLKNLQVLNMGSNLLSGSVPAVFGNLTKLEVLDLSQNPYLVSEIPDDIGELGNLKQLMLQSSSFQGEIPASFVGLVSLTHLDLSENNLTRGVPQALASALKNLVSFDVSQNKLRGPFPNGVCKGQGLINLSLHTNGFTGSIPNSIGECKSLERFQVQNNGFSGDFPAALWSLPKVKLIRAENNRLSGQIPESISGAVQLEQVQLDNNSFSGKFPQGLGLVKSLYRFSASLNHFYGELPPNFCDSPLMSIVNFSHNSLSGQIPELKKCRKLVSLSLADNSLTGEIPSSLAELPVLTYIDLSDNNLTGPIPQGLQNLKLALFNVSFNHLSGKVPYSLISGLPASYLEGNPDLCGPGLPNSCSDDIPKHPNGGLTTLTFALISLAFVAGTAILAGGFVLYRRSCKGNEVGVWRSVFFYPLRITEHDLLIGINEKSSLGNSGVFGKVYVMNLPGGELVAVKKLVNFGNQSSKSLKAEVKTLAKIRHKNIVKILGFCHSDESVFLIYEYLHEGSLGDLISSQNFELQWGVRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSNNILLDANFEPKLTDFALDRVLGEAAFQSTLDSEAPSSCYTAPEYGYSKKATEQLDVYSFGVVLLELVSGRKAEQAEPSESLDIVKWVRRKVNITNGVPQVLDPRISHTCHQGMAGALDIALRCTSVVPEKRPSMVEVLKSLQSLESRTCIANLQGANEEPSIPV* 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2282 888 Gene3D Transferase(Phosphotransferase) domain 1 673 882 - -
Dod01g2282 888 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Dod01g2282 888 Gene3D Ribonuclease Inhibitor 413 525 IPR032675 -
Dod01g2282 888 SUPERFAMILY L domain-like 210 523 - -
Dod01g2282 888 Gene3D Ribonuclease Inhibitor 24 186 IPR032675 -
Dod01g2282 888 PANTHER - 4 874 - -
Dod01g2282 888 CDD STKc_IRAK 605 868 - -
Dod01g2282 888 SMART LRR_typ_2 146 169 IPR003591 -
Dod01g2282 888 SMART LRR_typ_2 243 266 IPR003591 -
Dod01g2282 888 SMART LRR_typ_2 268 292 IPR003591 -
Dod01g2282 888 SMART LRR_typ_2 170 193 IPR003591 -
Dod01g2282 888 SMART LRR_typ_2 459 482 IPR003591 -
Dod01g2282 888 SMART LRR_typ_2 194 219 IPR003591 -
Dod01g2282 888 Gene3D Ribonuclease Inhibitor 187 290 IPR032675 -
Dod01g2282 888 Gene3D Ribonuclease Inhibitor 291 408 IPR032675 -
Dod01g2282 888 SUPERFAMILY L domain-like 26 290 - -
Dod01g2282 888 ProSiteProfiles Protein kinase domain profile. 597 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2282 888 SUPERFAMILY Protein kinase-like (PK-like) 604 865 IPR011009 -
Dod01g2282 888 Pfam Protein kinase domain 599 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2282 888 Pfam Leucine rich repeat 148 206 IPR001611 GO:0005515
Dod01g2282 888 Pfam Leucine rich repeat 436 495 IPR001611 GO:0005515
Dod01g2282 888 Pfam Leucine rich repeat 221 281 IPR001611 GO:0005515
Dod01g2282 888 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 874 - -
Dod01g2282 888 Gene3D Phosphorylase Kinase; domain 1 593 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2282 Dod-Chr1 60717616 60721497 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2282 28 868 Receptor kinase-like Gene Family AT5G06940 63.830 0.0 1067
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod01g2282 Pkinase 1.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2282 - - gmx:100794428 1499.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2282 01 60717616 60721497 Dod01g2282 01 60717616 60721497 ECH