Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2281 ATGGAGTCTCACGATGAGACAGGATGCCAGGCACCAGAACGTCCCATACTTTGCATTAATAACTGTGGTTTCTTTGGAAGGGCCGCTACCATGAATATGTGTTCCAAGTGTTACAAGGACATGCTGTTGAAGCAGGAGCAGGACAAGATTGTAGCCTCATCGGTTGAAAACATTGTGAATATCGGTTCAAGCAACAATGGAAAACAGGTTGTGACTGCTAGCGCTGTTGATGTACAAGTTGGAACTGCAAAGGTCAAGGCTGTCAGTGCTGAGATTTCTGGGGATTCGTCTTCCGTTGAGAGTTTGGAGATGAAAGCCAAGACTGGTCTGAGCAGATGTGCCACTTGCCGGAAGCGTGTTGGTTTAACCGGTTTCAGCTGCAAATGTGGAAACCTCTTTTGTGCACTGCATCGATACTCTGATAAACATGATTGCCCTTTTGATTATAGGACTGTTGGTCAGGATGCCATAGCTAAAGCCAACCCTGTGATTAAGGCAGATAAGCTTGACAAAATCTAG 519 0.4566 MESHDETGCQAPERPILCINNCGFFGRAATMNMCSKCYKDMLLKQEQDKIVASSVENIVNIGSSNNGKQVVTASAVDVQVGTAKVKAVSAEISGDSSSVESLEMKAKTGLSRCATCRKRVGLTGFSCKCGNLFCALHRYSDKHDCPFDYRTVGQDAIAKANPVIKADKLDKI* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2281 172 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 55 - -
Dod01g2281 172 Gene3D - 1 64 - -
Dod01g2281 172 Gene3D - 87 168 IPR035896 -
Dod01g2281 172 SMART AN1_Zf_4 113 150 IPR000058 GO:0008270
Dod01g2281 172 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Dod01g2281 172 SUPERFAMILY AN1-like Zinc finger 104 167 IPR035896 -
Dod01g2281 172 Pfam AN1-like Zinc finger 113 149 IPR000058 GO:0008270
Dod01g2281 172 ProSiteProfiles Zinc finger AN1-type profile. 107 153 IPR000058 GO:0008270
Dod01g2281 172 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Dod01g2281 172 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Dod01g2281 172 PANTHER AN1-TYPE ZINC FINGER PROTEIN 2 172 - -
Dod01g2281 172 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8 2 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2281 Dod-Chr1 60701783 60703936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2281 5 172 C2H2 Transcription Factor Family AT3G52800 41.420 8.51e-40 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2281 - - gmx:100499995 301.212