Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2280 ATGGCCAAGAAGAACAAAGCTAGGGTTCCCGATGACGACGAAATCGAAGCCGAACCTCACAACCACAACGACCAACAAAGCCTCTATGAGGTTCTTGGTGTGGAGAGAACAGCATCTCAACAGGCAATAAAGAAGGCATACTACAAGTTGGCGTTGCGACTCCATCCTGATAAGAACCCTGGCGATGAGGAAGCTAAAGAGAAATTTCAGCAACTGCAAAAAGTAATCTCAATTCTCGGGGATGAAGAGAAACGGGCTCTTTATGATCAGACTGGTTGTGTTGACGATGCTGACCTTGCTGGCGATGTTGTTCAGAATCTCCGTGAGTTTTTCAGAACAATGTACAAGAAGGTATTTGTTTTAATATATGATATCCTATTTCTTGATGCATGGAGGTATTCTTGTTTTCAATTTTGCAGTTTTCTTATGTATGAGCCACAGGTAACTGAAGCTGATATTGAGGAGTTTGAAGCAAACTATAGGGGATCTGACTCAGAGAAAAAGGACTTAATTGATTTATACAAGAAGTGCAAGGGTAATATGGACAGGCTTTTTTGTTCAATGCTTTGTTCAGATCCTAAATTTGACTCTCACCGATTCAAGGATATGCTTGATGAGGCTATAGTTGCTGGAGAACTAAAGGAAACAAAAGCCTACCAGAAATGGGCAAAGAAAGTATCTGAAATAAAACCCCCAACTAGTCCTATAAGGAGGAGGAAACAGTCAAATAAGCAGCCAGAAACAGATCTGTATGCAGTGATAGCACAACGGCAAAATGAGAGGAAAGGCCGGCTTGATTCAATGTTCTCATCTCTGGCCTCAAAATATGGTGGAGGTGATATGCCTGAACCCTCTGAAGAGGAATTTGAAGCTGCACGGAGAAAGCTGGAGAGTGGAAGATCCTCAAAAAAATCAAAGCAATCAAAGCGGAAGTAA 936 0.4177 MAKKNKARVPDDDEIEAEPHNHNDQQSLYEVLGVERTASQQAIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDADLAGDVVQNLREFFRTMYKKVFVLIYDILFLDAWRYSCFQFCSFLMYEPQVTEADIEEFEANYRGSDSEKKDLIDLYKKCKGNMDRLFCSMLCSDPKFDSHRFKDMLDEAIVAGELKETKAYQKWAKKVSEIKPPTSPIRRRKQSNKQPETDLYAVIAQRQNERKGRLDSMFSSLASKYGGGDMPEPSEEEFEAARRKLESGRSSKKSKQSKRK* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2280 311 SUPERFAMILY Chaperone J-domain 23 120 IPR036869 -
Dod01g2280 311 SMART dnaj_3 26 84 IPR001623 -
Dod01g2280 311 MobiDBLite consensus disorder prediction 230 249 - -
Dod01g2280 311 PRINTS DnaJ domain signature 47 62 IPR001623 -
Dod01g2280 311 PRINTS DnaJ domain signature 64 84 IPR001623 -
Dod01g2280 311 PRINTS DnaJ domain signature 29 47 IPR001623 -
Dod01g2280 311 PRINTS DnaJ domain signature 84 103 IPR001623 -
Dod01g2280 311 Pfam DnaJ domain 28 89 IPR001623 -
Dod01g2280 311 MobiDBLite consensus disorder prediction 1 23 - -
Dod01g2280 311 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 143 307 IPR042977 -
Dod01g2280 311 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 3 118 IPR042977 -
Dod01g2280 311 MobiDBLite consensus disorder prediction 231 245 - -
Dod01g2280 311 CDD DnaJ 29 81 IPR001623 -
Dod01g2280 311 MobiDBLite consensus disorder prediction 1 26 - -
Dod01g2280 311 ProSiteProfiles dnaJ domain profile. 27 92 IPR001623 -
Dod01g2280 311 MobiDBLite consensus disorder prediction 260 311 - -
Dod01g2280 311 MobiDBLite consensus disorder prediction 286 303 - -
Dod01g2280 311 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 143 307 - -
Dod01g2280 311 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 3 118 - -
Dod01g2280 311 Gene3D DnaJ domain 13 102 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2280 Dod-Chr1 60696310 60699294 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2280 29 89 C2H2 Transcription Factor Family AT1G74250 39.394 3.10e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2280 K09529 - gmx:100793909 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2280 01 60696310 60699294 Dod01g2280 01 60696310 60699294 ECH