Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2279 ATGGAGGAAGATAACTGTGAGACAAGGTCCAAGAAAATGGAAGATTATGAAGTAATAGAGCAAATTGGAAGAGGAGCATTTGGTTCTGCCTTTCTGGTTCTTCACGAGTCTGAGAAAAAGAGGTATGTGCTGAAAAAGATTCGCTTGGCCAAGCAAACGGAGAAGTTCAAACGTACAGCACACCAAGAGATGAACCTGATTGCAAAACTAAATAACCCATATATTGTGGAGTACAAGGATGCTTGGGTGGAGAAGGAGGATCATATATGCATTATAACTGGCTATTGTGAAGGAGGTGACATGTCTGAGAACATAAAAAAATCTCGAGGATCATTTTTCCCAGAGGAGAAAGTCTGCAAATGGCTGACTCAATTGTTGATAGCTGTGGACTACTTGCACTCTAATCGTGTAATCCACAGAGATCTTAAGTGTTCCAATATATTCCTCACCAAAGACAATAGCATTCGGCTTGGTGATTTTGGTCTTGCAAAGCGACTTAATCCAGAAGACCTTGCTTCCTCGATTGTTGGAACTCCAAATTACATGTGTCCTGAGCTCCTAGCTGATATACCTTACGGTTACAAATCTGATATGTGGTCGCTTGGTTGCTGCATGTTCGAGATTGCTGCACATCAACCAGCATTTCGTGCTCCGGACATGGCTGGACTTATTAATAAAATAAACAGATCCTCCATTTCTCCATTGCCAATTGTTTATTCTTCCACACTGAAACAACTTATCAAGAGCATGCTGAGGAAAAACCCAGAACATAGACCAACAGCAGCCGAGTTGTTAAGGCATCCTCATTTACAACCTTATGTTCTCCGATGTCAAAATGCGACATCTAATTTTCTTCCTGTATACCCCTTAGTTAACCCAAAGGATAAAGCTAGAAGATCTCATAAATCTAGTGGTGGCAAGGACCATAGGGACAAAGAAGAAGGATTACTTAATCGTTTGGAACGTGTTCATCCAATTGATGGTAATGGAGATGTTCAGCCAAGCGGTCTCCCAAGTGATGGCGAGCTTACTGTCTCCAGCAGTGCAGAAGCAGAAGCAGAAGACAACCTTGAGACCAAGAGAGTTGATCTTACCAGCTACATAGTGGAAACTTCTACTAGTACTAGTGGCTCAAAAGATGGGTCAACAACATCTGGATCAACTATTTGCAGCATGTGCAAAGACCCAGATTTTAAAAGTAGACCTGCAAAGGAAACTTCTAACAGTGAGATCACTTTAAAGAGTACACAAGATACTGTGCATGAAGAACAAGGATTTGCTGCTGAACATCTGCAGAACTTGGAAAGGGCTGACATAAATGCTGTGACAACAGAAGTTGAAGATGCTTTTTCGAATGAAGGCTCTGGTAAGGCGGAAGCACAGAGGGAAGATGCCAAACATGAAGACTCCAGGAAATCAACAACGACCAGTGCAGGCAGTAGCAGCACTGATGAAGATAAGTCCATTGATGAGGAAAGGCCATCTCTAATTTTGTGTCCTATTGGGGTTGGAGCACAGTGGGAAGATGCCAAGCTTGAGGAGTCCAGGAAATCAACAGTGTCCAGTGCCGGCAGTGGCATCCATTCTGGAAATGGGTCAAAGGAAAGTGAAAACCCAGATGCATTTAAAAACGGCTCACAAACGAACTGCTTGTCATCTGAGTATAATGATACACTTCCAGTTAAGGATGAAGACAGACTAACAACACACATAATTTGCTCCTCACATAAGGAAGAAGATAATGGCATTGTGGTTGATAAGAAACTGAGTGACATTTCAGTGAGTATACGTACTTCGATAGATAGTGATGTAACAACCAAGTCTGAGTTGGATAGTCCCTGCCAGCAAAGAGCTGAGGCTCTTGAATCTCTGCTTGAGTTGTGTGCTCAGTTACTTAAGCAAGATAAGCTTGAAGAACTTGCAGCAGTGCTAAGACCATTTGGAAAAGAAGCTGTCTCATCCAGAGAAACAGCAATATGGCTCACAAAGAGCCTTATATCAGCCCAAAAGTTCAATCCTGAAACCTAG 2028 0.4236 MEEDNCETRSKKMEDYEVIEQIGRGAFGSAFLVLHESEKKRYVLKKIRLAKQTEKFKRTAHQEMNLIAKLNNPYIVEYKDAWVEKEDHICIITGYCEGGDMSENIKKSRGSFFPEEKVCKWLTQLLIAVDYLHSNRVIHRDLKCSNIFLTKDNSIRLGDFGLAKRLNPEDLASSIVGTPNYMCPELLADIPYGYKSDMWSLGCCMFEIAAHQPAFRAPDMAGLINKINRSSISPLPIVYSSTLKQLIKSMLRKNPEHRPTAAELLRHPHLQPYVLRCQNATSNFLPVYPLVNPKDKARRSHKSSGGKDHRDKEEGLLNRLERVHPIDGNGDVQPSGLPSDGELTVSSSAEAEAEDNLETKRVDLTSYIVETSTSTSGSKDGSTTSGSTICSMCKDPDFKSRPAKETSNSEITLKSTQDTVHEEQGFAAEHLQNLERADINAVTTEVEDAFSNEGSGKAEAQREDAKHEDSRKSTTTSAGSSSTDEDKSIDEERPSLILCPIGVGAQWEDAKLEESRKSTVSSAGSGIHSGNGSKESENPDAFKNGSQTNCLSSEYNDTLPVKDEDRLTTHIICSSHKEEDNGIVVDKKLSDISVSIRTSIDSDVTTKSELDSPCQQRAEALESLLELCAQLLKQDKLEELAAVLRPFGKEAVSSRETAIWLTKSLISAQKFNPET* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2279 675 MobiDBLite consensus disorder prediction 295 314 - -
Dod01g2279 675 MobiDBLite consensus disorder prediction 514 549 - -
Dod01g2279 675 ProSiteProfiles Protein kinase domain profile. 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2279 675 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 10 491 - -
Dod01g2279 675 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 529 658 - -
Dod01g2279 675 MobiDBLite consensus disorder prediction 371 391 - -
Dod01g2279 675 MobiDBLite consensus disorder prediction 447 495 - -
Dod01g2279 675 Gene3D Transferase(Phosphotransferase) domain 1 98 318 - -
Dod01g2279 675 SMART serkin_6 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2279 675 MobiDBLite consensus disorder prediction 324 359 - -
Dod01g2279 675 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 10 491 - -
Dod01g2279 675 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 529 658 - -
Dod01g2279 675 MobiDBLite consensus disorder prediction 457 473 - -
Dod01g2279 675 MobiDBLite consensus disorder prediction 405 419 - -
Dod01g2279 675 Gene3D Phosphorylase Kinase; domain 1 1 95 - -
Dod01g2279 675 MobiDBLite consensus disorder prediction 371 419 - -
Dod01g2279 675 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Dod01g2279 675 SUPERFAMILY Protein kinase-like (PK-like) 13 295 IPR011009 -
Dod01g2279 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Dod01g2279 675 CDD STKc_Nek 15 270 - -
Dod01g2279 675 Pfam Protein kinase domain 16 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2279 675 MobiDBLite consensus disorder prediction 517 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2279 Dod-Chr1 60687215 60693253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2279 9 271 MAP Kinase Kinase Kinase AT3G13530 31.698 2.32e-37 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Dod01g2279 Pkinase 2.6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2279 K08857 - gmx:100793379 989.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2279 01 60687215 60693253 Dod01g2279 01 60687215 60693253 ECH
Dod01g2279 01 60687215 60693253 Dod07g1205 07 31483109 31490144 PCT