Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2266 ATGCTTGAACAGGAAAGTCTCCTTAGGTCACCATTGTTGCTGTGTGTTTTCATATGCTTCTTGCTACATCCTGTTGTGACAGCTGTGATACCTTTAGGTTCCAAATTTTCTGTGGTTGACAATGAATGTTGGGTTTCCTCAAATGGTGATTTTGCAATTGGATTCTTTAACACTTCAGATGAACCTAGCCAGTTTAGTGTTGGCATTCGTTTCAATGCAAAGTCTATACCATATAGCCAACAAACAGTGGTTTGGATTGTTGGAGCACATGTCACAGTAGGAAACATGTCCTATTTCCAATTCACCCCAGAAGGGGATCTGGTCCTGTTTGATCCCTTAGGAGGCCGTGCATGGAGCAGTGGAACGCGTAACCGAGGTGTTGTTTTGGCTTCTCTTCATGATAGTGGCAATCTTGTTCTGACAGACAAGGAGCAGAACATCATTTGGCAAAGTTTTGGTAATCCAGGTGATACACTCCTTCCAGGACAGCCTTTATCTGCTTATCAGACGCTTCGTGCTATGGCCAAGAGTGCCGTGTCCAGTTACTACAGCCTTTACATGAATGCTTCGGGGCAGTTGCAGCTTCACTGGGAGAGCAATATCACCTACTGGACAAGTGAAAGCCCTTCTACTTCAAACCTCACTGCACTTCTTACAACCAGTGGAGCTCTGCAACTTCTAGACAAAAGTTCCAGAGTTGTTTGGAGTGTGTTTGGAGAAGACCACAATGATTCTGTGAACTACCGATTTCTTAGACTAGATGTGGATGGCAATCTCCGCCTGTATTCATGGGTAGAAACTTCACAGTCATGGAGATCAGTATGGCAAGCTGTTGAGAATCAGTGCAAGGTTTTTGCAACTTGTGGTAAACGGGGTGTCTGCGTCTTCAATGCTTCAGATATTGCTGATTGCGAGTGCCCTTTTGAGGCAACTGAGTCTAGCACATGTTTGGTTCCATATGAACAAGAGTGTGAATCTGGGTCCACTATGCTAACATACAGGAACACACATCTATATGGAATTTACCCCCCTGATGATTTAGTTATTGTAAGTAATCTTGAGCAATGTGAACAATTGTGCCTGAATGACTCAAGGTGTACTGTTGCAACGTTTTCCAATAATGGTATTCCACAGTGCTCCATAAAGAAAACTGAGTATGTCACTGGCTATGCAGATCCATCTCTAAGCTCAATATCATTTGTTAAGAGATGTTCAGGTCCTTTTGCTGTAAACCCCACTCTCGTGAACTCACCTCCACCAAAATTACCTCCTAGCATTTGTGTTCCTTGTCTAGTAGGAGCAGCCTCAGGCACATGTTTTGTCTTTGCGATCCTTCAGCTGGGAGTTGTTTTGTACATCTACAGAAGAAAATATTCTAATAGGAGAAAAGCTAATACATCTTTCACAGGCTCAAACTCAAAGGGCTTAATTGCATTATCCTACTCAGAAATCAAGAGCCTCACTGGGGATTTGAAGGATCATATTGGGCAAAATATGTTCAAGGGCATGTTACCAAACAGCTGCCTGGTTGCAGTTAAAGAGCTGAATGCATCCATCGAAGAAAGGAAGTTCCGGAGTGCTGTTATGAAGATGGGGAGCATCCACCACAAGAACCTTGCGAAGCTGGAGGGCTATTGCTGTGAGTTCAATCATAGATTCTTGGTCTATGAATATGCCAAAAATGGTTCTCTGGACAAGTATATAGATGATTCTACCCTTTGCAAGAAGCTAACTTGGACGAAGAGAGTTGAAATATGCTCAAGTGTGGCAAAGGCCATCAGTTATCTTCACTCTGGGTGTCGGGAGTTCATGAGCCATGGAAACCTGAGATGTGAAAATGTCATATTGGATGAAAACTTAGAGGCCAAAGTAACTGAATTCGGGTTTGCAGTAATAGATGGCGAGGCTGTGTATTGCGGCTTCTCGGCTGAGAGGGATGTAGGGGATTTTGGCACGTTAGTGTTAACCTTGTTGACTGGATGCAGAGATCATGAAGAACTTTGTGAGTGGTCATACAAAGAATGGATAGAAGGTAATGCTGCAAATGTGGTTGACAATAGAATTGTGGGTGGCTTCAATTCAGATGAACTTGAGCGTGCATTAAGAATTGCATTCTGGTGCCTTCAAATGGATGAACGTAGGAGGCCTTCAATGGGGGAGGTTGTGAGAGTGCTAGATGGTACATTGAGTGTTGATCCTCCACCACCTCCATTTGCCTTCCAGAGGCCATTGTTGGAAGATGAGCCACAAGATAATAATGGTTCAGAACCAGAGATTCAGTAG 2283 0.4354 MLEQESLLRSPLLLCVFICFLLHPVVTAVIPLGSKFSVVDNECWVSSNGDFAIGFFNTSDEPSQFSVGIRFNAKSIPYSQQTVVWIVGAHVTVGNMSYFQFTPEGDLVLFDPLGGRAWSSGTRNRGVVLASLHDSGNLVLTDKEQNIIWQSFGNPGDTLLPGQPLSAYQTLRAMAKSAVSSYYSLYMNASGQLQLHWESNITYWTSESPSTSNLTALLTTSGALQLLDKSSRVVWSVFGEDHNDSVNYRFLRLDVDGNLRLYSWVETSQSWRSVWQAVENQCKVFATCGKRGVCVFNASDIADCECPFEATESSTCLVPYEQECESGSTMLTYRNTHLYGIYPPDDLVIVSNLEQCEQLCLNDSRCTVATFSNNGIPQCSIKKTEYVTGYADPSLSSISFVKRCSGPFAVNPTLVNSPPPKLPPSICVPCLVGAASGTCFVFAILQLGVVLYIYRRKYSNRRKANTSFTGSNSKGLIALSYSEIKSLTGDLKDHIGQNMFKGMLPNSCLVAVKELNASIEERKFRSAVMKMGSIHHKNLAKLEGYCCEFNHRFLVYEYAKNGSLDKYIDDSTLCKKLTWTKRVEICSSVAKAISYLHSGCREFMSHGNLRCENVILDENLEAKVTEFGFAVIDGEAVYCGFSAERDVGDFGTLVLTLLTGCRDHEELCEWSYKEWIEGNAANVVDNRIVGGFNSDELERALRIAFWCLQMDERRRPSMGEVVRVLDGTLSVDPPPPPFAFQRPLLEDEPQDNNGSEPEIQ* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2266 760 CDD B_lectin 45 155 IPR001480 -
Dod01g2266 760 Pfam PAN domain 334 396 IPR003609 -
Dod01g2266 760 MobiDBLite consensus disorder prediction 732 760 - -
Dod01g2266 760 Pfam S-locus glycoprotein domain 243 306 IPR000858 GO:0048544
Dod01g2266 760 Gene3D Phosphorylase Kinase; domain 1 452 558 - -
Dod01g2266 760 PANTHER OS07G0415500 PROTEIN 8 754 - -
Dod01g2266 760 SMART ntp_6 325 403 IPR003609 -
Dod01g2266 760 ProSiteProfiles Protein kinase domain profile. 463 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2266 760 SUPERFAMILY alpha-D-mannose-specific plant lectins 177 273 IPR036426 -
Dod01g2266 760 Gene3D - 31 154 IPR036426 -
Dod01g2266 760 ProSiteProfiles Bulb-type lectin domain profile. 156 274 IPR001480 -
Dod01g2266 760 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD3-1 8 754 - -
Dod01g2266 760 SUPERFAMILY Protein kinase-like (PK-like) 499 725 IPR011009 -
Dod01g2266 760 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 206 IPR036426 -
Dod01g2266 760 ProSiteProfiles Bulb-type lectin domain profile. 29 153 IPR001480 -
Dod01g2266 760 Pfam D-mannose binding lectin 82 167 IPR001480 -
Dod01g2266 760 SMART blect_4 35 155 IPR001480 -
Dod01g2266 760 Gene3D Transferase(Phosphotransferase) domain 1 559 637 - -
Dod01g2266 760 Gene3D Transferase(Phosphotransferase) domain 1 638 731 - -
Dod01g2266 760 ProSiteProfiles PAN/Apple domain profile. 324 404 IPR003609 -
Dod01g2266 760 Pfam Protein tyrosine and serine/threonine kinase 506 630 IPR001245 GO:0004672|GO:0006468
Dod01g2266 760 PIRSF SRK 3 637 IPR024171 GO:0004674
Dod01g2266 760 PIRSF SRK 635 759 IPR024171 GO:0004674
Dod01g2266 760 Gene3D - 155 273 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2266 Dod-Chr1 60461341 60465187 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2266 444 754 Receptor kinase-like Gene Family AT4G05200 28.490 1.35e-39 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dod01g2266 PK_Tyr_Ser-Thr 1.2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2266 - - gmx:100809478 1169.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2266 01 60461341 60465187 Dod01g2266 01 60461341 60465187 ECH