Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2213 ATGGCGCCAAAACGAAAACCTTCATCTCCAATCTGTATTGGTAACTGTGAGATAACCGTCGCGGCTAACAACTTCACCTGCAAATCCGATTCAAGAGGCACCGTAATCTCTCTCCTAAGAAGCGGAAAGATCATAGTATCAGTGGCACAAGACGTGTCTGCAAACCATAGAGATGCCTCTGAGAATTTTAATTCCAAGGATAGAGAACATGAGTTCATGCTTGTTAGTCCTAAAGATGATGATGGAATTAGCAAATCATTCTTGCAGGAAGTCTTACAGATGTATGTGACAGAGCTACCTGCAATGAATTACGCTGCTAATACCGGAAAGAAGTCAAAGTTTCTTGAAAGATGTGTGACAAATGGGAAATATCGTACACTACTTCTGAAATCCAGTTCTGTTGGAAATTCTGAAAAGGTTATAGCTGCAATTACGTATCAAATCATCCCTGCAGATACAGAACATGCAGAGATCCCATTGGCAGCTGTCAATGCAATCTATCAAAGAAAGGGTTTTGGTCGTCTGTTGTTTCAAGAGCTAGAGAAGAGACTTCAAAGGATTGGCATTCGTTCTATTTTCTGTTGGGGGGACAAAGAATCTGAAGGATTTTGGCTTAAACAGGGTTTTATATCAATAGCACAAGTGGACGCCAAAGGTAGAGCCCGCAGGTTACCTGTAAAAGCTGATATTCGCAAATCATTATGCTTTCCTGGTGGTTCAACTCTCATGGTTTACCATCTAAGGAAGGAATTCTTAGCTGATGCTGCTAACTCTATGAAGTGTTTCCCCTCACAGCTTCATCAGAATTCCTTGACATCTGCCATTGCTCAAAATGAGCGGCTTGAACTTTCAGGAGAGCTACACATTGATTTGAACTTTTCACATCAATCATCCCATAGAACAAAAGATACCGATAAAAGTCAAGCTGAAGCTTTGAGGAAAGATGGATCTTCAAGAGAATATGACAAACTCTGTGGTTTTGATGATCACAATCCTGAGCCCCGCAGCAGTGACGTTGTTCCTTTTGCCAGAGGAAATGATGACAGACAGGACACTGTTGCAAAACATTTACAGGATGGAAATGATGATAATGTGAAGCCTTGTTTTCAATCTACAAAAGGTGCAAAAAGGGCCTGGGAAGCCTCTATATCCTCGTTGAAGTCAAAGAGAGTGAAGGGAAGCCAATTGGTTGACTGTCGATCAGATTCTAGCTGGGGTTTTACATCAGAGGCTAATAGGTCCAATCCTTCTTTTCTGGAAGGTCCTCATGTTGATCCTGTGAGTTTAGAAGCTCCCATCAACAAGGAACTGCTATCAACTAAACAATGCTTTAGAATCATGTTAATGAATATTGCTGATGATACTAAGAGAACACAGCTTTCAAAGGTGATTGAAGACCTTGGTGGGACTGTTGCCTATGATGGAAGCATGACCACACATGTTGTCACAGGAAGAGTGAGGAAAACTCTGAATTTCTGCACCGCTCTCTGTTCTGGGGCTTGGGTGGTCTCATCAAACTGGTTAAAAGAGAGTTTTCGTGAAGGCAGATTTGTTGATGAATTGCCTCACATACTGAATGATGAGGATTATCTGTTGAAGTACAAATCTGAGTTAAAAAGTGCAGTTTTCCGAGCAAAAGTTAGCCCCCATTCCTTGTTTAAGAGGTATAATGTATGCATTGCAGCTCATGTTCCAACTCCTGCTGAAACACTGTCTGCCATTGTCAGGTCTGCTGGGGGTAATGTTGTTAGTGGGCTCGAGAAAGTAAATGAAGCATCAAGTACAATATATGTGACATGCGAAGAAGATACAGAAGAAGCAATGATGGCTGCCAAGAAGGGGATACGGACTTTTAGTAGTGAGTGGTTTATGAACTGTGTCATGAGACAAGAGCTTGACTTGGAGGCTTCCCAATTCGCGGAGTCCTTATAA 1932 0.4182 MAPKRKPSSPICIGNCEITVAANNFTCKSDSRGTVISLLRSGKIIVSVAQDVSANHRDASENFNSKDREHEFMLVSPKDDDGISKSFLQEVLQMYVTELPAMNYAANTGKKSKFLERCVTNGKYRTLLLKSSSVGNSEKVIAAITYQIIPADTEHAEIPLAAVNAIYQRKGFGRLLFQELEKRLQRIGIRSIFCWGDKESEGFWLKQGFISIAQVDAKGRARRLPVKADIRKSLCFPGGSTLMVYHLRKEFLADAANSMKCFPSQLHQNSLTSAIAQNERLELSGELHIDLNFSHQSSHRTKDTDKSQAEALRKDGSSREYDKLCGFDDHNPEPRSSDVVPFARGNDDRQDTVAKHLQDGNDDNVKPCFQSTKGAKRAWEASISSLKSKRVKGSQLVDCRSDSSWGFTSEANRSNPSFLEGPHVDPVSLEAPINKELLSTKQCFRIMLMNIADDTKRTQLSKVIEDLGGTVAYDGSMTTHVVTGRVRKTLNFCTALCSGAWVVSSNWLKESFREGRFVDELPHILNDEDYLLKYKSELKSAVFRAKVSPHSLFKRYNVCIAAHVPTPAETLSAIVRSAGGNVVSGLEKVNEASSTIYVTCEEDTEEAMMAAKKGIRTFSSEWFMNCVMRQELDLEASQFAESL* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2213 643 MobiDBLite consensus disorder prediction 294 335 - -
Dod01g2213 643 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 4 643 - -
Dod01g2213 643 CDD NAT_SF 136 195 - -
Dod01g2213 643 ProSiteProfiles BRCT domain profile. 548 632 IPR001357 -
Dod01g2213 643 SUPERFAMILY BRCT domain 445 527 IPR036420 -
Dod01g2213 643 Pfam Acetyltransferase (GNAT) family 136 209 IPR000182 GO:0016407
Dod01g2213 643 Gene3D BRCT domain 433 549 IPR036420 -
Dod01g2213 643 Pfam BRCA1 C Terminus (BRCT) domain 451 512 IPR001357 -
Dod01g2213 643 Gene3D BRCT domain 550 642 IPR036420 -
Dod01g2213 643 SUPERFAMILY BRCT domain 542 632 IPR036420 -
Dod01g2213 643 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 114 214 IPR016181 -
Dod01g2213 643 CDD BRCT_PAXIP1_rpt6_like 552 633 - -
Dod01g2213 643 PANTHER N-ACETYLTRANSFERASE 4 643 - -
Dod01g2213 643 MobiDBLite consensus disorder prediction 294 346 - -
Dod01g2213 643 ProSiteProfiles BRCT domain profile. 446 525 IPR001357 -
Dod01g2213 643 SMART BRCT_7 435 515 IPR001357 -
Dod01g2213 643 SMART BRCT_7 550 630 IPR001357 -
Dod01g2213 643 Gene3D - 69 222 - -
Dod01g2213 643 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 86 231 IPR000182 GO:0016407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Dod01g2213 BRCT 2.4e-06 CL0459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2213 - - aip:107645523 976.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2213 01 59349422 59356524 Dod01g2213 01 59349422 59356524 ECH