Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2203 ATGGCCTTCCTAGCTCTAAGTAGGACCAACATCACCACAGATAAGCAAGCACTTGTTGCTCTCAGATCTTCCATAAGTGGAGACCCTTACCATTTCCTCACCCATAATTGGTCTTCCCACTCTTCTTCTGTGTGCAACTGGGTTGGTGTCACTTGTGATGCTCAACATGGAAGAGTAAGGACCTTGAATCTTGGTGACATGGGTCTTAGTGGCACCATACCCTCCCATTTGGGGAACCTCTCCTTCCTCATTGAACTTGACCTTGGTGGAAACAGTTTCCACCATCAGTTGCCTGAAGAACTAGTCCAGCTGCGTAGATTGAAGTCACTCAACTTGAGCTACAATGAGTTCAGCGGAAATTTTCCAGCATGGATAGGGGGCTTATCTTCACTCCGATACTTGAACCTTGCAAATAATGGCTTTGGTGGTTTTGTTCCACAGTCTTTATCCAATCTGACAATGCTAGAGGCCTTGGGTTGGGACAGCAATCAAATTGAAGGATCCATTCCACCTGAAGTTGGCAAAATGACCCACTTGAGGATTTTGTCTCTCTCTGAAAATAGTCTTTCAGGGGCCATTCCTCGAACGATTTCTAATCTCTCTTCACTGGAAAAAATCAGTTTATCTTATAACTCTCTATCAGGAGGCATTCCAAGGGAGATTGGTGAACTTCCACAGCTAAGAGTAATGTATCTCGAAAATAATCCACTTGGTGGCTCCATACCATCAACAATCTTCAATAATTCAATGCTACAAGAAATTGACCTTGGGTGGAGTAATTTATCTGGCAGTCTTCCACCAAACATATGCCATGGACTTCCAGAAATCCGAGAGCTTTATTTAGGTTTCAACCAGATTTCTGGAAAAATGCCATCGGTTTGGCATCAGTGCAAAGAGTTGACTGATGTAGACTTAGCAAAGAATAGTTTCAGCCGAGGAACCATACCACTTGATATGGGAAACTTAACCATGCTTGGCACCTTATACCTTGATGAAGACAACTTGGAAGGAGAAATTTCATCATCTATTTTTAACACATCTTCAATAACAGTACTCAGCCTTAAGGAAAACAAGTTGAATGGTAGCCTCACAGAAGATATGTTTCATCAGCTCCCTTTACTAGAATCCTTGTATCTGGATAATAATCAATTTGTGGGAAGCATTCCAAAATCTATTAGCAATTGTACTATGCTTGAAGAATTATATTTGGCGGACAACTCTTTCACAGGTTCTATACCTAAGGGGATTGGTGATCTTCCTCTACTTACAAAATTAGTTTTGGGAGGTAACATTCTAAGCGGAACCATTCCCCCAAATATCTTCAACATGTCATCTCTGAGTTACTTGTATCTAGCAGAGAATTCCCTCTCAGGATCTCTTCCATTGCATATCAACCTAGAAGACTTGGAAGGACTATACTTGTTTGGAAACCAACTTAGCGGAAAAATTCCAAGTAGCATATCCAATGCTTCTAAGCTTGACACTTTGGACTTGAAACAGAATAAATTCAGTGGAGCAATACCCAATGCTATTGGGAACTTGAGACATCTTAAGTGGCTTGATGTATCAAACAATAATTTAACCACTTATGCTTCCACTATTGAATTGAGCCTTCCTACTTCTTTGAATTATCTTGTCATATTAGGGAATCCATTGCATGCAAAGCTTCCCAAATCCATTGGAAACATGTCCAATTTGGAACAGTTCGCTGCTGACTTGTGCAGCATCTATGGTAACATTCCTTTGGAAATTGGAAATCTAAGCAGAGTGTTTGCACTAAGTTTGTCCCAGAATGATTTAAGTGGGCCAATTCCAACTACAATAAATGGTTTGCTGTCTCTTCAATATTTGAGCCTTGGCAACAATAAACTACAAGGAACCATCATTGGTGAAATTTGTGAAATAAAAAGGCTGAGCGAGTTGTACATAACTGAAAACAAGCTGATCACTGGGGAGATCCCAGCATGCTTTGGTAACCTTACTTATCTAAGAAAGCTTTACCTGAACTCTAACAATCTCAGTGGAGTGCCATTTTCTCTTTGGAGTCTCAAAGACATTCTTGAGCTAAACTTATCTGACAATGCTTTAACTGGATCTCTTCCACCTGAAGTCAGGAGCTTAAAAGTTGTTATATTTTTGGATCTATCAAAGAATAGGATTTCTGGAAGCATTCCTAGGGCCATTGCAGGATTACAAAATTTGCAAATTCTCAACTTATCACAAAATAAACTGCTAGGGGACATTCCTGATTCACTTGGCCATTTGATAAGTTTGACATCCTTGGACTTATCCCAAAACTATTTGTTTGGTGTGATTCCAAAATCCTTGGAATCACTTCGTTATCTTAAATTTATCAATCTTTCTTATAATACGTTAGAAGGAGAGATTCCCAATGGTGGACCTTTTAGAACTTTCACTGCTCAATCATTCATGTTTAACAAAGCACTTTGTGGAAATACTCGACTACAAGTCCCATCATGCAGTAAAGTAAAAAAGCAAAGGTCAAATGCAAATATGTTTTTCCTCAAATGCATATTGCCTATAGTAGTGTCAATCATTTTGGTTACTTTGTGTGTATTCCTTGTAATAAGGCATAGAAGAAAGAATGATGGTGACCCTAATGAAGGAAGTTTATCAACATTATTACCAACAATAAACATGATCTCGTATTATGAACTTTCACAAGCAACCAATGGATTTGATGAGAGTAATTTACTTGGTAAGGGCAGTTTTGGCTCTGTGTTCAAAGGTATACTTTCAAATGGGAAAGTAGTTGCAATCAAATTATTTAATTTGGACTTGGAATTAGGATCAAAGAGCTTTAGTGCAGAATGTGAAGCAATGCGCAATTTGCGTCATCGAAATCTCATCAAGATCATCAATTGCTGTTCAAGTCTAGATTATAAGCTTTTAGTAATGGAGTTCATGCCCAATGGGAGCCTTGAGAGATGGTTGTATTCTCATAACCATTGTTTAAATTTCTTGCAAAGGCTTAATATAATGATAGATGTGGCATCTGCATTGGATTACCTGCATCATGGGTCTTCACCAAAAGTGGTTCATTGTGATGTAAAGCCTAATAATGTCCTATTGGATGAAGACATGATTGCGCATGTTTGTGATTTTGGCATTGCCAAACTTCTAGATGAAGGACAATCCAAAGAATATACCAAGACCATGGCTACGATTGGCTATATTGCACCAGAGTTTGGATCCAAAGGGATTATCTCCACAAAAGGAGACGTATATAGTTTTGGGATAATGTTGATGGAAACATTCACAAGAAAGAAGCCAACAGATGAGATGTTTGTTACTGGATTGAGTTTGAAAGGTTGGATTAGTGAATCACTACCTCATGCAATTACTAGAGCTGTGGATTCCAATTTGTTACAGGATGAAGAGCATCATTTTGATGACATAATAGCATATACTGCATCTATCTTCAGATTGGCCTTAGATTGTTGTGCAGATTTACCTGAAGAAAGGATGAATATGACAGATGTTGCTGCATCATTAATCAAAATCAAGGTCTTGTTTCTCCAAACTGGTGATGCTAGGCACATTGGAACATGA 3573 0.3871 MAFLALSRTNITTDKQALVALRSSISGDPYHFLTHNWSSHSSSVCNWVGVTCDAQHGRVRTLNLGDMGLSGTIPSHLGNLSFLIELDLGGNSFHHQLPEELVQLRRLKSLNLSYNEFSGNFPAWIGGLSSLRYLNLANNGFGGFVPQSLSNLTMLEALGWDSNQIEGSIPPEVGKMTHLRILSLSENSLSGAIPRTISNLSSLEKISLSYNSLSGGIPREIGELPQLRVMYLENNPLGGSIPSTIFNNSMLQEIDLGWSNLSGSLPPNICHGLPEIRELYLGFNQISGKMPSVWHQCKELTDVDLAKNSFSRGTIPLDMGNLTMLGTLYLDEDNLEGEISSSIFNTSSITVLSLKENKLNGSLTEDMFHQLPLLESLYLDNNQFVGSIPKSISNCTMLEELYLADNSFTGSIPKGIGDLPLLTKLVLGGNILSGTIPPNIFNMSSLSYLYLAENSLSGSLPLHINLEDLEGLYLFGNQLSGKIPSSISNASKLDTLDLKQNKFSGAIPNAIGNLRHLKWLDVSNNNLTTYASTIELSLPTSLNYLVILGNPLHAKLPKSIGNMSNLEQFAADLCSIYGNIPLEIGNLSRVFALSLSQNDLSGPIPTTINGLLSLQYLSLGNNKLQGTIIGEICEIKRLSELYITENKLITGEIPACFGNLTYLRKLYLNSNNLSGVPFSLWSLKDILELNLSDNALTGSLPPEVRSLKVVIFLDLSKNRISGSIPRAIAGLQNLQILNLSQNKLLGDIPDSLGHLISLTSLDLSQNYLFGVIPKSLESLRYLKFINLSYNTLEGEIPNGGPFRTFTAQSFMFNKALCGNTRLQVPSCSKVKKQRSNANMFFLKCILPIVVSIILVTLCVFLVIRHRRKNDGDPNEGSLSTLLPTINMISYYELSQATNGFDESNLLGKGSFGSVFKGILSNGKVVAIKLFNLDLELGSKSFSAECEAMRNLRHRNLIKIINCCSSLDYKLLVMEFMPNGSLERWLYSHNHCLNFLQRLNIMIDVASALDYLHHGSSPKVVHCDVKPNNVLLDEDMIAHVCDFGIAKLLDEGQSKEYTKTMATIGYIAPEFGSKGIISTKGDVYSFGIMLMETFTRKKPTDEMFVTGLSLKGWISESLPHAITRAVDSNLLQDEEHHFDDIIAYTASIFRLALDCCADLPEERMNMTDVAASLIKIKVLFLQTGDARHIGT* 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2203 1190 Gene3D Ribonuclease Inhibitor 273 533 IPR032675 -
Dod01g2203 1190 SMART serkin_6 900 1179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2203 1190 Pfam Leucine Rich Repeat 130 152 IPR001611 GO:0005515
Dod01g2203 1190 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 275 527 - -
Dod01g2203 1190 SMART LRR_typ_2 466 490 IPR003591 -
Dod01g2203 1190 SMART LRR_typ_2 80 104 IPR003591 -
Dod01g2203 1190 SMART LRR_typ_2 755 778 IPR003591 -
Dod01g2203 1190 SMART LRR_typ_2 273 296 IPR003591 -
Dod01g2203 1190 SMART LRR_typ_2 224 248 IPR003591 -
Dod01g2203 1190 SMART LRR_typ_2 419 443 IPR003591 -
Dod01g2203 1190 SMART LRR_typ_2 514 537 IPR003591 -
Dod01g2203 1190 SMART LRR_typ_2 731 754 IPR003591 -
Dod01g2203 1190 SMART LRR_typ_2 128 151 IPR003591 -
Dod01g2203 1190 SMART LRR_typ_2 660 683 IPR003591 -
Dod01g2203 1190 SMART LRR_typ_2 371 395 IPR003591 -
Dod01g2203 1190 SMART LRR_typ_2 176 200 IPR003591 -
Dod01g2203 1190 SUPERFAMILY L domain-like 32 361 - -
Dod01g2203 1190 Pfam Leucine rich repeat 326 384 IPR001611 GO:0005515
Dod01g2203 1190 Pfam Leucine rich repeat 734 792 IPR001611 GO:0005515
Dod01g2203 1190 Pfam Leucine rich repeat 637 696 IPR001611 GO:0005515
Dod01g2203 1190 Pfam Leucine rich repeat 178 237 IPR001611 GO:0005515
Dod01g2203 1190 Pfam Leucine rich repeat 470 527 IPR001611 GO:0005515
Dod01g2203 1190 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1019 1031 IPR008271 GO:0004672|GO:0006468
Dod01g2203 1190 ProSitePatterns Protein kinases ATP-binding region signature. 906 928 IPR017441 GO:0005524
Dod01g2203 1190 PANTHER - 342 1179 - -
Dod01g2203 1190 Gene3D Ribonuclease Inhibitor 163 272 IPR032675 -
Dod01g2203 1190 PANTHER - 139 365 - -
Dod01g2203 1190 Gene3D Transferase(Phosphotransferase) domain 1 976 1182 - -
Dod01g2203 1190 Gene3D Phosphorylase Kinase; domain 1 865 975 - -
Dod01g2203 1190 PANTHER - 275 527 - -
Dod01g2203 1190 PANTHER - 5 147 - -
Dod01g2203 1190 Gene3D Ribonuclease Inhibitor 534 836 IPR032675 -
Dod01g2203 1190 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 139 365 - -
Dod01g2203 1190 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 147 - -
Dod01g2203 1190 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 342 1179 - -
Dod01g2203 1190 SUPERFAMILY L domain-like 349 588 - -
Dod01g2203 1190 SMART LRR_sd22_2 660 678 - -
Dod01g2203 1190 SMART LRR_sd22_2 611 634 - -
Dod01g2203 1190 SMART LRR_sd22_2 176 202 - -
Dod01g2203 1190 SMART LRR_sd22_2 707 733 - -
Dod01g2203 1190 SMART LRR_sd22_2 466 492 - -
Dod01g2203 1190 SMART LRR_sd22_2 755 781 - -
Dod01g2203 1190 SUPERFAMILY L domain-like 574 818 - -
Dod01g2203 1190 ProSiteProfiles Leucine-rich repeat profile. 733 755 IPR001611 GO:0005515
Dod01g2203 1190 ProSiteProfiles Protein kinase domain profile. 900 1180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2203 1190 SUPERFAMILY Protein kinase-like (PK-like) 876 1172 IPR011009 -
Dod01g2203 1190 Pfam Leucine rich repeat N-terminal domain 13 53 IPR013210 -
Dod01g2203 1190 Pfam Protein kinase domain 901 1168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g2203 1190 Gene3D Ribonuclease Inhibitor 10 162 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2203 Dod-Chr1 59207286 59219401 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2203 684 797 Receptor kinase-like Gene Family AT3G47570 31.884 2.63e-10 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Dod01g2203 Pkinase 3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2203 K13420 - gmx:100784397 1726.45