Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod01g2199 | ATGCTTGACTATGCACTTCAAAAGGTTATTTCTAAACTTGCACCTGCCCAGAGACAAAAAGTGGCTCTTCTTGTAGAAGCTTTTGAAACAATTCGGCCATTCCAAGATGCTCAAAATGGCTCACTGTCTTCCACAACAATGGAAACTCAAGCAAATCCAATTCAACCTCTTTATGACTCCTCAGATCATGGCAAGGAAGAAACAGACAAAGATATTGCTAGTGATAATCCAATGCCTGAATTGCACAATCCTATTGTGCTCAAAGAAAGATGTCTTGACTATCCTGGGACCAAAACAGTTGAGAATATGCCTGCACCTAGAGCTGTTGAAGAAGAATTGAATTCAAAGCAATGTCTAGCTAGCAGTTATGATGATGGGGAGAAGGCACTAAATGGCAATGATAATATTCATCTTGCAGAGATAAAAGATTCCAGATCCAGGTCCTTAAGCAAGCCAGTTGAAAATATAAGCAGCTGTCATGAGGAGGCTCCAGCCAAAGGAATAATCAATGAAGTTCCAGAAGAGTTGATATCTAATTCAGATAAAGGAAGTTTGACTAGCCAATCTGAGTCATCTGGAGGAGATTATGAAACCAACAATAATATTGGTGCTAATAGAGGACAATTTTATTTGTCTAAAAGTTTACTCCTAAAAGGTCTTGCCAGGTCACTCGGAACTAATTTGATTGGTTCAGGAGAATCTTCAGACCTGTTAGATGAAGATGAGCGAACAGCAGACAGAAAAGAAAGGATTGAAAAAGCTAATCCGGTAACAAGCAGTCTTGAAGAGATCCCTGCACATGAGCAATCTAAAGGTCCTGTGAGTGCTACAATAGCACCTGAGACTCACCCAGAGAAACAGAACTACATGGGACTGTGGTCCTTGGTGTATAAGCATATGGTATCAGATTTAGCAGGAAATGATTCGAAGTCATTAAGTGATGGGGCAGATGAGAAAGTATCAGAGTATGAAAGCAGCAGAATAAGAGGAACTTCTGTCCCATATGAAAGTCCACATGTGATGAATCAGGATATGGACTTCAAGGATCATAGTGTAGCTGATCCAGATGTTGAAGTCCAACAAATTGAAGCCATCAAGATGGTAGAAGAAGCGATTGATTCAATCATTCCTGATGTTCAGGATCACACTCCAGACAGACAGTTGCTTACTGACAACACAATTTCAGACAACACCAAACAATCCAGCAGAACTGAAAGTGTGTGCAGTGAAGGCCTCAGCCAAAAGGCAGAAAAGATTGCATCAGGAAGTGGAATAACTCAAGAACAAAAGGAGGAAGAAGGAACAGCATCAAAGGAGGGAAACAACCCAAAGCAGCAATTACCTAGAAGCTGGAGCAATCTTAAAAAAGTGATCCTGCTAAGGAGATTCATCAAGGCATTGGAGAAAGTAAGAAAGTTCAATCCAAGAGGGCCTAGATATCTTCCCATAGAGCCTGATCCAGAAGCTGAAAAAGTTAACTTAAGGCATCAAGACATGGCTGAAAGAAAAGGCACAGAAGAATGGATGCTTGATTACGCGCTTCGCCAGGTTGTTTCCAAATTGACACCAGCAAGGAAAAGAAAAGTGGAGCTGCTAGTTGAAGCTTTTGAAACAGTCACGCCAACCATAAGAAACTGA | 1638 | 0.4096 | MLDYALQKVISKLAPAQRQKVALLVEAFETIRPFQDAQNGSLSSTTMETQANPIQPLYDSSDHGKEETDKDIASDNPMPELHNPIVLKERCLDYPGTKTVENMPAPRAVEEELNSKQCLASSYDDGEKALNGNDNIHLAEIKDSRSRSLSKPVENISSCHEEAPAKGIINEVPEELISNSDKGSLTSQSESSGGDYETNNNIGANRGQFYLSKSLLLKGLARSLGTNLIGSGESSDLLDEDERTADRKERIEKANPVTSSLEEIPAHEQSKGPVSATIAPETHPEKQNYMGLWSLVYKHMVSDLAGNDSKSLSDGADEKVSEYESSRIRGTSVPYESPHVMNQDMDFKDHSVADPDVEVQQIEAIKMVEEAIDSIIPDVQDHTPDRQLLTDNTISDNTKQSSRTESVCSEGLSQKAEKIASGSGITQEQKEEEGTASKEGNNPKQQLPRSWSNLKKVILLRRFIKALEKVRKFNPRGPRYLPIEPDPEAEKVNLRHQDMAERKGTEEWMLDYALRQVVSKLTPARKRKVELLVEAFETVTPTIRN* | 546 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod01g2199 | 545 | MobiDBLite | consensus disorder prediction | 60 | 76 | - | - | |
Dod01g2199 | 545 | PANTHER | CALMODULIN-BINDING PROTEIN-RELATED | 1 | 543 | IPR044681 | GO:0005516 | |
Dod01g2199 | 545 | MobiDBLite | consensus disorder prediction | 236 | 256 | - | - | |
Dod01g2199 | 545 | MobiDBLite | consensus disorder prediction | 376 | 448 | - | - | |
Dod01g2199 | 545 | MobiDBLite | consensus disorder prediction | 229 | 279 | - | - | |
Dod01g2199 | 545 | MobiDBLite | consensus disorder prediction | 179 | 200 | - | - | |
Dod01g2199 | 545 | PANTHER | CALMODULIN BINDING PROTEIN PICBP | 1 | 543 | - | - | |
Dod01g2199 | 545 | MobiDBLite | consensus disorder prediction | 307 | 338 | - | - | |
Dod01g2199 | 545 | MobiDBLite | consensus disorder prediction | 38 | 81 | - | - | |
Dod01g2199 | 545 | Pfam | Plant calmodulin-binding domain | 437 | 540 | IPR012417 | GO:0005516 | |
Dod01g2199 | 545 | Pfam | Plant calmodulin-binding domain | 1 | 31 | IPR012417 | GO:0005516 | |
Dod01g2199 | 545 | SMART | CaM_binding_2 | 427 | 541 | IPR012417 | GO:0005516 | |
Dod01g2199 | 545 | MobiDBLite | consensus disorder prediction | 38 | 57 | - | - | |
Dod01g2199 | 545 | MobiDBLite | consensus disorder prediction | 386 | 411 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod01g2199 | Dod-Chr1 | 59166972 | 59168686 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod01g2199 | 424 | 542 | Calmodulin-binding Proteins | AT5G04020 | 55.200 | 9.43e-35 | 138 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod01g2199 | - | - | aprc:113861458 | 658.292 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod01g2199 | 01 | 59166972 | 59168686 | Dod01g2199 | 01 | 59166972 | 59168686 | ECH |