Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2188 ATGGGGTTGGCTGCTGCAGAGTCACAGTTTCATGTATTGGCTGTTGATGACAGCATCATAGATAGGAAGCTCATTGAGAGGCTTCTCAGAACATCCTCCTATCAAGTTACTACAGTTGATTCTGGTACCAAGGCCTTAGAATTTCTGGGCCTGAGTGAGAATGATGATGGCAGAAAAATTACACCATCTGTTTCTCCTAATAATCATCAGGAGGTTGAGGTGAATCTTGTTATAACAGACTACTGTATGCCTGGCATGACAGGCTATGATTTGCTCAAGAAAATCAAGGAATCTTCATCTCTGAGAAACATACCAGTGGTGATTATGTCATCTGAGAATGTGCCTTCTAGGATTACAAGATGCTTGGAGGAAGGAGCAGAAGAGTTTTTCTTGAAGCCTGTGAGGCTTGCAGATTTGAATAAGCTTAAACCCCATATGAAGAGGAGGACCAAGTTGAAGTGTCAAAAGCAAGAAGCACCAGAAAAGCCTGAGGATCCAGAAGCACCAAAACAGCAGCAACAGCCACAACAACCAATCCAACAAAGTGAAAAAACACAGCAACCAATCCAAAATGAACAGCCACCACAACAACCAATCCAAAATGAGCAGCAACAAGCACCACCACAACCCCAACAACCGCATTCACAGTCACAGCCACAAACACAGCCAACTATAGAACAACAGCAACAATCACATCAACAACAAGCCAACAGCAATAACAAGAGGAAGACCATGGAGCAGGGACTTTCACCTGAGACTGACCGAAATAGACCAAGATACAGTGGCATAGCCACTGTGGTATGA 804 0.4378 MGLAAAESQFHVLAVDDSIIDRKLIERLLRTSSYQVTTVDSGTKALEFLGLSENDDGRKITPSVSPNNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRITRCLEEGAEEFFLKPVRLADLNKLKPHMKRRTKLKCQKQEAPEKPEDPEAPKQQQQPQQPIQQSEKTQQPIQNEQPPQQPIQNEQQQAPPQPQQPHSQSQPQTQPTIEQQQQSHQQQANSNNKRKTMEQGLSPETDRNRPRYSGIATVV* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2188 267 SUPERFAMILY CheY-like 9 152 IPR011006 -
Dod01g2188 267 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 198 263 - -
Dod01g2188 267 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 3 212 - -
Dod01g2188 267 Gene3D - 11 257 - -
Dod01g2188 267 MobiDBLite consensus disorder prediction 153 168 - -
Dod01g2188 267 Pfam Response regulator receiver domain 12 141 IPR001789 GO:0000160
Dod01g2188 267 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 212 IPR045279 GO:0009736
Dod01g2188 267 CDD REC_typeA_ARR 12 142 - -
Dod01g2188 267 MobiDBLite consensus disorder prediction 169 246 - -
Dod01g2188 267 MobiDBLite consensus disorder prediction 147 267 - -
Dod01g2188 267 PANTHER TWO-COMPONENT RESPONSE REGULATOR 198 263 IPR045279 GO:0009736
Dod01g2188 267 SMART REC_2 10 143 IPR001789 GO:0000160
Dod01g2188 267 ProSiteProfiles Response regulatory domain profile. 11 147 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2188 Dod-Chr1 58940932 58943353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2188 1 267 Response Regulator Gene Family AT3G57040 55.970 2.23e-91 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod01g2188 Response_reg 1.2e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2188 K14492 - gmx:100788079 264.618