Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2170 ATGGTCATTGCTAACAAGTACAAGGAGGGAGACCCTGATGAGATTTTGTTGAATAATGAGGATGCCAACGAAGATGAACAGGATATTGAAGCTGTCAAGTATGCGAGTGGGAGTAATAGTAGTAGTGACAAGGATGGTGAAGTGCCTAATTCTTTCTCTTCTAAGCAATGGCCTCAAAGTTACAGAGACGCCACTGATTCTTACACAATTGCTGCAGCTCCAAATCTTGAATCAGTTCTACGAGCACCGAGTATGATTTACTCGAGCTTTGTGAATTGGTCAAAGAGTTACTTAGAACTAGATGGAAGGACTTCGACTTCTTTTCTATCTGGCCAGGGAGCCGGCAGTGCATATCAAGAAGGGATCACGACAAGACAATCAACATGGTGGGAGAAAGCTTCAATTCAAATGCAAATTCCTGATGAATTGCCCATTGGTTATGGATGTAGCCTCACTCAAACAGTATTCAATGAGATTAATGTGATGGCTGGAGTTGGCCTTCTGTCTACCGCTTATTCTGTGAAGCAAGCTGGGTGGGCGAGTTTGCCGGTGATGCTTCTTTTCGCAGTTGTGTGTTGTTATACGGCAGAACTTATGAAACACTGCTTTGAAAGCAGAGAAGGGATCATTAGCTACCCTGATATAGGAGAGGCTGCATTTGGAAGATATGGCCGCCTTGTTGTATCAGTAAGTTTGCTTCTTAGATCATATTGTGTGGAATTTATCATCTTGGAAGGAGATAACCTTGCTGGGCTGTTTCCTGGAACATCCTTGAATTGGGGCAGTTTCCACTTGGACTCCAAGCACTTGTTTGGTGTTTTGACTGCACTTATCGTTCTCCCTACTGTTTGGTTGAAGGATCTTCGTTTAATCTCCTATCTCTCAGCTGGAGGGGTACTTGCTACAGCTGTGATCATTATCTGTGTGTTCATTGTTGGGACAAGTGATGCAGTTGGATTCCATCATCACACTGGTCCATTGGTGCATTGGAGTGGCTTGCCCTTTGCTTTTGGTATCTTTGGATTTTGCTTTGCAGGACACTCAGTTTTTCCAAATATTTACCAGTCTATGGCAGATAAAAGAGAATTTACAAAGGCAATGATCACAAGTTTTATTATATGCATGTTGGTAAATGGAAGTGTTGCAGTCATGGGATATCTCATGTTTGGTGAAGGGACTTTATCTCAGATAACACTGAATCTGCCCGCAAATGCCTTTGCTTCTAAAGTTGCCTTGTGTACAATAAACAGCATTGGTTTTGGCTACACTTTGTGCTGCTTTTATGATTCCATTTTTTGGGCTTATGATGGCTTTAATTGGTTCTCTCCTCAGTGTAGTTGTGGCGTTGATATTGCCAGCTTTATGTTTTCTGAAAATTGTAGGGAGAAAAGCAACAAGCGCACAGGGTTACTGAGACCTTCACTGTTTCAGCACAAATATGGCCATTTCAATTATTGTGATGATGGCAATAAGACCTTTCTATCTCCGGAGCCCTTCATTGCAAGGTTCAAGTTTTGTAGTGGAATACATAAATGTTTTAGCATTTTGTTACGTGAAAAATCAGCAAATGCTCACTCACGTTTGTAG 1587 0.4178 MVIANKYKEGDPDEILLNNEDANEDEQDIEAVKYASGSNSSSDKDGEVPNSFSSKQWPQSYRDATDSYTIAAAPNLESVLRAPSMIYSSFVNWSKSYLELDGRTSTSFLSGQGAGSAYQEGITTRQSTWWEKASIQMQIPDELPIGYGCSLTQTVFNEINVMAGVGLLSTAYSVKQAGWASLPVMLLFAVVCCYTAELMKHCFESREGIISYPDIGEAAFGRYGRLVVSVSLLLRSYCVEFIILEGDNLAGLFPGTSLNWGSFHLDSKHLFGVLTALIVLPTVWLKDLRLISYLSAGGVLATAVIIICVFIVGTSDAVGFHHHTGPLVHWSGLPFAFGIFGFCFAGHSVFPNIYQSMADKREFTKAMITSFIICMLVNGSVAVMGYLMFGEGTLSQITLNLPANAFASKVALCTINSIGFGYTLCCFYDSIFWAYDGFNWFSPQCSCGVDIASFMFSENCREKSNKRTGLLRPSLFQHKYGHFNYCDDGNKTFLSPEPFIARFKFCSGIHKCFSILLREKSANAHSRL* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2170 528 PANTHER OS05G0424000 PROTEIN-RELATED 38 417 - -
Dod01g2170 528 MobiDBLite consensus disorder prediction 1 58 - -
Dod01g2170 528 MobiDBLite consensus disorder prediction 33 58 - -
Dod01g2170 528 Pfam Transmembrane amino acid transporter protein 150 427 IPR013057 -
Dod01g2170 528 PANTHER AMINO ACID TRANSPORTER AVT1A 38 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2170 Dod-Chr1 58680902 58687297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2170 33 411 Amino Acid or Auxin Permease AAAP Family AT2G41190 59.137 1.79e-153 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2170 K15015 - gmx:100790344 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2170 01 58680902 58687297 Dod01g2170 01 58680902 58687297 ECH