Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2168 ATGGGTAGTAGAGGTAGAACAGTCAACGTTAGCAGTGAGGACACTAACAGGGTTGTCAACAACGGGATGCCAAGCTACGCTCCTTCCTTGCCTTCTTCTTCTGGTTCCATGGGCATAGATGCAGCTAATGTTCTTCCTTCTCGAATTTCTGAATTTGGAACCCTTGAGCAATCTCTAGGATTTCGTGTTGAGGATGCCATCAATCTTAGCAGAAATCCAGTGTTTAGTCAAATGAAATCAAATAGCCAGGCCCTAGGAGCTGATGTTCAATTTGGTGCTTTAAGTAAGTCGATTGCAAATTCAGATATAAACCTATCTGCCGCAATTGCTGGGTCTCAGTTGTTGCCATTACAAAAAGATTCGCAACCAAATCTGGCTTCGACATCTGCTGGTCATCGTGAGAATTGGGGAGAGTCCAACATGGCAGATGGAAGCCCTAGGACTGATACATCGACGGATGATACGGAAGATAAAAATCAAATGCCTGAAAGGGGTGATTCCAGCGAAAGATCAAAAGATAAAGCAGATCAAAAGACATTGCGACGGCTAGCTCAAAATCGTGAGGCTGCCAGAAAAAGCCGGCTGAGGAAAAAGGCATACGTGCAACAATTAGAGAGCAGTAGGCTGAAACTGACCCAACTTGAGCAGGAGCTGCAGCGAGCCCGCCAGCAGGGAATATTTATTTCAAGCTCCGGAGATCAGGCCCATTCAATGAGTGGAAATGGTGCTATGGCATTTGACGTAGAGTATGCACGATGGTTAGAAGAGCATAATAGGCAAACCAATGAGCTAAGGGCGGCAATAAATTCTCATGCTGGTGATATTGAACTTCGCACAATTGTCGACAATTTCATGACCCAGTTTGATGATATCTTCAGGCTGAAAGGTATTGCTGCAAAAGCTGATGTTTTCCACATTCTGTCAGGAATGTGGAAGACTCCAGCTGAGAGGTGTTTCATGTGGATCGGGGGCTTTCGCTCATCTGAGCTTCTCAAACTTCTTGTGAATCAACTGGAGCCATTAACTGAGCAGCAATTGATGGGCATCTACAACTTGCAGCAGTCATCCCAGCAGGCTGAAGATGCACTGTCTCAAGGAATGGATGCATTGCAGCAATCACTTGCTGAGACATTGGCTAATGGTTCACCCAACCCATCAGGCTCCTCAGGAAATGTGGCAAATTATATGGGGCAAATGGCTATGGCCATGGGAAAGCTTGGTACTCTTGAAGGGTTTCTTCGCCAGGCTGATAATCTGCGGCAGCAAACGTTACAACAAATGCTTCGGATATTGACAACCAGGCAATCAGCTAGAGCTCTTCTTGCAATAAGTGATTATTTCTCGCGGCTGCGAGCTCTGAGTTCTCTGTGGCTTGCCCGGCCAAGGGAGTGA 1392 0.4626 MGSRGRTVNVSSEDTNRVVNNGMPSYAPSLPSSSGSMGIDAANVLPSRISEFGTLEQSLGFRVEDAINLSRNPVFSQMKSNSQALGADVQFGALSKSIANSDINLSAAIAGSQLLPLQKDSQPNLASTSAGHRENWGESNMADGSPRTDTSTDDTEDKNQMPERGDSSERSKDKADQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQAHSMSGNGAMAFDVEYARWLEEHNRQTNELRAAINSHAGDIELRTIVDNFMTQFDDIFRLKGIAAKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLMGIYNLQQSSQQAEDALSQGMDALQQSLAETLANGSPNPSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2168 463 PANTHER TRANSCRIPTION FACTOR TGA9 64 463 - -
Dod01g2168 463 SUPERFAMILY Leucine zipper domain 178 221 IPR046347 GO:0003700|GO:0006355
Dod01g2168 463 Coils Coil 197 224 - -
Dod01g2168 463 CDD bZIP_HBP1b-like 178 230 - -
Dod01g2168 463 MobiDBLite consensus disorder prediction 121 148 - -
Dod01g2168 463 PANTHER TGACG-SEQUENCE-SPECIFIC DNA-BINDING PROTEIN TGA-2.1 64 463 - -
Dod01g2168 463 ProSiteProfiles DOG1 domain profile. 243 460 IPR025422 GO:0006351|GO:0043565
Dod01g2168 463 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 176 220 IPR004827 GO:0003700|GO:0006355
Dod01g2168 463 MobiDBLite consensus disorder prediction 149 179 - -
Dod01g2168 463 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 181 196 IPR004827 GO:0003700|GO:0006355
Dod01g2168 463 Pfam bZIP transcription factor 177 218 IPR004827 GO:0003700|GO:0006355
Dod01g2168 463 MobiDBLite consensus disorder prediction 121 179 - -
Dod01g2168 463 Pfam Seed dormancy control 261 335 IPR025422 GO:0006351|GO:0043565
Dod01g2168 463 Gene3D - 177 228 - -
Dod01g2168 463 SMART brlzneu 174 237 IPR004827 GO:0003700|GO:0006355
Dod01g2168 463 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2168 Dod-Chr1 58593245 58600448 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2168 141 463 bZIP Transcription Factor Family AT3G12250 76.435 1.68e-177 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod01g2168 DOG1 1.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2168 K14431 - gmx:100780071 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2168 01 58593245 58600448 Dod01g2168 01 58593245 58600448 ECH