Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2153 ATGCCTTACCTTGTCCGAGAGAATCTGTTCATCGGAAATATCGGCGACGCCGCGGAGATTCTCCAAAACGGCAGCGCAGACGTCACGCACATACTCTCCGTCCTCAGCTCCGCCTCCATCTCCTTCTTCTCCGAATGGCGCCCAGGCCTCAACATCCCCGTCAAGGAGATCGATAAGGCCTACGTCGCCGGAAAACACTCCATCGGCGGCGGCGGCGGCAATAGCGGCTCCAAGAGCGCGCTCTCGCCGGAGAAGCTTCTCTACTCGCTGGAGTACGCAGGGCGCGACTTGAAGCTCGTGAGGATGGCCGTGCCTCTCAAGGACACTGAGAACGAGGACTTGCTCGATTACCTTGAAGTTTGCATCGACTTCATCGATCGGAGTAGGAAGGAAGGTCCCGCTTTGGTTCACTGTTTCGCCGGAGTTTCTAGAAGTGCGGCGATTATAACGGCGTATTTGATGAGAACGGAACGTCTCTCTCTAGAAGATGCCCTTGAATCATTAAGGCAGAGCTGTGAATTTGTTTGCCCCAATGATGGCTTTCTAGAGCAGTTGAGAATGTTTGAGGAGATGGGCTTCAAGGTTGATCAGTCCAGCCCTCTATACAAGCGCTTTCGTCTGAAAATACTTGGTGAGAAACATTTCTCGGGACTAGGGATAGACAGTTCTAAACTTGGTGCAGATCCCGGCATGCCAGTCCAAATTTCTTCAGAGGTTGAACAAGCTACTAAAGCAGAAAATAATCGTAGTCCTACGTATCGCTGTAAGAAGTGCCGACGGATTGTTGCATTGCAAGAACATGTTGTAGATCATATTCCTGGTGAGGGTGAGGCATCTTTTGATTGGCACAAGAGGAGAAGTGGCAACCCTTTTAACAAGTCTAATGAATCTGAGTGTTCATCCATATTTATTGAGCCTCTTCGATGGATGAAAGCTGTTGAGGAAGGCGCGTTGGAGGGAAAGCTGTCTTGTGCTCATTGTGATTCCCGTTTGGGATACTTCAATTGGGCAGGCATACAATGCAGCTGCGGAAGCTGGATAACCCCAGCTTTTCAACTCCACAAAAGTCGGGTAGATATAAGCCCTGTATAA 1092 0.5 MPYLVRENLFIGNIGDAAEILQNGSADVTHILSVLSSASISFFSEWRPGLNIPVKEIDKAYVAGKHSIGGGGGNSGSKSALSPEKLLYSLEYAGRDLKLVRMAVPLKDTENEDLLDYLEVCIDFIDRSRKEGPALVHCFAGVSRSAAIITAYLMRTERLSLEDALESLRQSCEFVCPNDGFLEQLRMFEEMGFKVDQSSPLYKRFRLKILGEKHFSGLGIDSSKLGADPGMPVQISSEVEQATKAENNRSPTYRCKKCRRIVALQEHVVDHIPGEGEASFDWHKRRSGNPFNKSNESECSSIFIEPLRWMKAVEEGALEGKLSCAHCDSRLGYFNWAGIQCSCGSWITPAFQLHKSRVDISPV* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2153 363 SMART dsp_5 1 191 IPR020422 GO:0006470|GO:0008138
Dod01g2153 363 Gene3D Protein tyrosine phosphatase superfamily 4 211 IPR029021 -
Dod01g2153 363 ProSiteProfiles Dual specificity protein phosphatase domain profile. 1 194 IPR020422 GO:0006470|GO:0008138
Dod01g2153 363 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 4 194 IPR029021 -
Dod01g2153 363 CDD DSP_DUSP12 4 196 - -
Dod01g2153 363 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 115 170 IPR000387 GO:0016311|GO:0016791
Dod01g2153 363 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER 1 359 - -
Dod01g2153 363 PIRSF DUSP12 3 45 IPR016278 GO:0006470|GO:0008138
Dod01g2153 363 PIRSF DUSP12 92 363 IPR016278 GO:0006470|GO:0008138
Dod01g2153 363 Pfam Dual specificity phosphatase, catalytic domain 101 190 IPR000340 GO:0008138|GO:0016311
Dod01g2153 363 ProSitePatterns Tyrosine specific protein phosphatases active site. 136 146 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2153 Dod-Chr1 58356881 58360672 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2153 99 190 Protein tyrosine phosphatase (PTP) family AT3G06110 37.634 3.52e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2153 K14819 - gmx:100776877 595.89