Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2144 ATGCTACTTGAGTCATGTACTACGATTGCATTTGCTACAATAATTATTGTTCTACTTTCACAAACACTTGTTGGGGTGACCTCATTTCCAGAAGCTGATAAGATAAGCAGTTTACCAGGCCAGCCACCAGTCACATTCCAGCAATATGCTGGTTACATTACTGTGGATGACAAACAAGAGAGAGCTTTGTTTTACTACTTTGTTGAAGCTGAAGTAGACCCTTCTTCCAAGCCACTAGTTCTATGGTTGAATGGAGGGCCTGGTTGTTCATCTATTGGTGTTGGAGCTTTTGTTGAGCATGGCCCTTTCAAACCGGGTGACAACGTTCTTGTGAAGAATGATTATAGTTGGAATAAAGAGGCAAATGTGCTATACTTGGAATCACCAGCTGGTGTCGGTTTCTCCTACTCCAGCAATAAATCTTTTTATAACCTAATCACAGATGAAATTACAGCAAGGGATAATCTTGTTTTTCTACAGCGCTGGTTTACTAAATTCCCAGAGTACACAAAAAATGACTTCTTCATTACAGGGGAAAGCTATGCAGGTCACTACGTTCCACAGCTTGCACAACTTATTGTTCAAACCAACAAGAAGTTCAATCTTAAGGGAATAGGAATAGGAAATCCTCTTCTGGAGTTTAATACTGATTTCAACTCCAGAGCTGAATTCCTGTGGTCCCATGGGTTGATATCAGATTCAACTTATGAAGTCTTCAATAGAGTATGTAACTATTCTCAAATTGGGAGACAAACTATAAATGGGAATCTTAGCGACGATTGTGCAACAGTATTTAAACTAATGAGCATTGAGGTTAGCATATATATTGATAGATATGATGTCACCCTTGATGTCTGTTTGTCATCAGTGAAACAACAAGTATATGTGCTGGATAAAATGCAAGAGACGGAAAAGATAGATGTTTGTGTGAAAGACAAAACAGTGTTATACTTAAACAGAAAAGAAGTGCAGGAAGCTCTACATGCTAAGCTTGTTGGGGTCACTAAATGGTCAACATGCAGCGAGGTTGTCAACTATGACTATCAGAATCTAGAGATACCAACAATTCCAATTCTAGGTTCACTTGTTAAGTCTGGCATTCGGGTTCTAGTATACAGTGGGGACCAGGATTCAGCAATCCCATTAATTGGATCGCGATCTCTGGTGAACGGATTAGCCAAGGAAATTGGACTGAAAACAACAGTGTCTTATAGAGCATGGTTTGAGGGAAAACAGGTAGCAGGATGGACACAAGTATATGGCAATAATACTATCTTATCATATGCCACCATAAGAGGAGCATCTCATGAAGCTCCCTTTTCTCAACCAGCGAGATCACTCGTGCTACTTAAAGCTTTTCTAGATGGAAAGCCACTTCCAAGTATCATATAA 1392 0.3958 MLLESCTTIAFATIIIVLLSQTLVGVTSFPEADKISSLPGQPPVTFQQYAGYITVDDKQERALFYYFVEAEVDPSSKPLVLWLNGGPGCSSIGVGAFVEHGPFKPGDNVLVKNDYSWNKEANVLYLESPAGVGFSYSSNKSFYNLITDEITARDNLVFLQRWFTKFPEYTKNDFFITGESYAGHYVPQLAQLIVQTNKKFNLKGIGIGNPLLEFNTDFNSRAEFLWSHGLISDSTYEVFNRVCNYSQIGRQTINGNLSDDCATVFKLMSIEVSIYIDRYDVTLDVCLSSVKQQVYVLDKMQETEKIDVCVKDKTVLYLNRKEVQEALHAKLVGVTKWSTCSEVVNYDYQNLEIPTIPILGSLVKSGIRVLVYSGDQDSAIPLIGSRSLVNGLAKEIGLKTTVSYRAWFEGKQVAGWTQVYGNNTILSYATIRGASHEAPFSQPARSLVLLKAFLDGKPLPSII* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2144 463 Gene3D alpha/beta hydrolase 28 460 IPR029058 -
Dod01g2144 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Dod01g2144 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Dod01g2144 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 426 439 IPR001563 GO:0004185|GO:0006508
Dod01g2144 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Dod01g2144 463 Pfam Serine carboxypeptidase 39 455 IPR001563 GO:0004185|GO:0006508
Dod01g2144 463 ProSitePatterns Serine carboxypeptidases, histidine active site. 426 443 IPR033124 GO:0004185
Dod01g2144 463 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 461 IPR001563 GO:0004185|GO:0006508
Dod01g2144 463 SUPERFAMILY alpha/beta-Hydrolases 36 460 IPR029058 -
Dod01g2144 463 PANTHER CARBOXYPEPTIDASE 13 461 - -
Dod01g2144 463 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2144 Dod-Chr1 58217393 58221048 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2144 317 459 Calmodulin-binding Proteins AT2G22960 31.469 6.74e-19 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2144 K16297 - gmx:100799900 752.666