Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2142 ATGTTTCCCCATCCCCAGCAATGGATCCTCTTGGTAGCCATAATCAGTGCAGCTTTACTGCCACTACCCTCATCGGTTATGTCCTTTCCAGAAGCTGACAAGGTGAAAAGCTTGCCTGGCCACCCACCAGTTTCTTTCCAGCAATTTGCTGGCTATGTTGCTGTTGATGACAAGCATCAGAGAGCTCTATTTTACTACTTTGTTGAAGCAGAAACAAACCCAGCTTCAAAGCCTCTTATTCTATGGCTAAATGGAGGTCCTGGCTGTTCATCTATTGGAGGTGGAGCATTCATAGAACATGGTCCTTTCCTTGCAAATCTAAATGAGGCTATTGTGAAAAATCAGTATAGCTGGAACAAAGAGGCCAATATTTTGTACCTTGAATCACCAGCAGGTGTTGGGTTCTCTTACTCCGTCAACGAGTCCTTTTACAGCCCACTGAACGATGAGGCCACGGCCCGAGACAATCTGGTTTTCCTGCAGCGCTGGTTTGCCAAATTCCCGGAGTATAAAAATAGAGAATTTTATATAATGGGAGAGAGTTATGCAGGTCACTATGTGCCTCAACTTGCACAACTCATTGTTAAGAGTAAAGAGAACTTCAACCTGAGGGGCATAGCAATAGGAAATCCTCTTCTGGAATTCGACGCTGATATGAATGCAATGGATGAGTATTACTGGTCTCATGGAATTATAAGCGACTACGCTTACAAAATTCGGGTCTCTCTTTGTAACTCGTCTAGATTAAACAGGGAACTGATCAGTGGCCCTGTCTCCCCCAGTTGCATTGCTGCAGAGCAAAGAGTTAATGAAGAATACTCTTCTACAGATGACCTGGACCCATATTATGTTATTGGGAACAAATGTTTTTCTTACAATCTATCTCAGGCAGGTTTCCTTAGCGAGTTTCTAAGTACAAGACTGCCTCAGGTTTTCAAGTCTCAATATGTGCAACAAACTGATGAACTTGACCAGGGAGTTGATGAGTGTATTGAGAAATATGCAGATATGTACTTGAACAGGAAAGATGTGCAGAAGGCTCTCCATGCCAGACTGGTGGGAACTGCCCGTTATCATTTATGCAGCAAATATGTACAATTGAAATATGATATAGCAGACAGAGAAATACCAACGATTGATGTTGTAGGCTTCCTTGTAAAGTCAGGCCTCCGCGTCATCGTTTACAGTGGGGATCAAGACTCTGTCATTCCATTCATGGGCACACGAAGATTGGTTGATAGACTAGCAAGGAAACTGGGTCTTAAAACAACTGTGCCTTATAGTGCTTGGTTTGTGGACAAGCAGATTGGAGGATGGACTCAAGTTTATGGGAATCACCTCACCTACGCCACAGTAAGAGGAGCACCACACACCGCTCCAAGTACTCAGCCAAAGAGATCTTTTGTGTTGTTTAATGCATTTCTTCATGGGAAACCACTTCCTAAAGCTTGA 1452 0.4346 MFPHPQQWILLVAIISAALLPLPSSVMSFPEADKVKSLPGHPPVSFQQFAGYVAVDDKHQRALFYYFVEAETNPASKPLILWLNGGPGCSSIGGGAFIEHGPFLANLNEAIVKNQYSWNKEANILYLESPAGVGFSYSVNESFYSPLNDEATARDNLVFLQRWFAKFPEYKNREFYIMGESYAGHYVPQLAQLIVKSKENFNLRGIAIGNPLLEFDADMNAMDEYYWSHGIISDYAYKIRVSLCNSSRLNRELISGPVSPSCIAAEQRVNEEYSSTDDLDPYYVIGNKCFSYNLSQAGFLSEFLSTRLPQVFKSQYVQQTDELDQGVDECIEKYADMYLNRKDVQKALHARLVGTARYHLCSKYVQLKYDIADREIPTIDVVGFLVKSGLRVIVYSGDQDSVIPFMGTRRLVDRLARKLGLKTTVPYSAWFVDKQIGGWTQVYGNHLTYATVRGAPHTAPSTQPKRSFVLFNAFLHGKPLPKA* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2142 483 Gene3D - 330 366 - -
Dod01g2142 483 SUPERFAMILY alpha/beta-Hydrolases 35 481 IPR029058 -
Dod01g2142 483 PANTHER CARBOXYPEPTIDASE 5 482 - -
Dod01g2142 483 ProSitePatterns Serine carboxypeptidases, serine active site. 177 184 IPR018202 GO:0004185
Dod01g2142 483 Gene3D - 379 477 - -
Dod01g2142 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Dod01g2142 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Dod01g2142 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Dod01g2142 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 447 460 IPR001563 GO:0004185|GO:0006508
Dod01g2142 483 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 5 482 IPR001563 GO:0004185|GO:0006508
Dod01g2142 483 Pfam Serine carboxypeptidase 41 477 IPR001563 GO:0004185|GO:0006508
Dod01g2142 483 Gene3D alpha/beta hydrolase 30 291 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2142 Dod-Chr1 58199471 58203472 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2142 335 480 Calmodulin-binding Proteins AT2G22960 30.822 7.59e-18 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2142 K16297 - gmx:100819443 736.487