Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2141 ATGGCATCGAGCTCAATGTCAGCCTCTGGCTCATGGAGTGCTAAGGACAACAAGGCCTTTGAGAGAGCTCTAGCTGTGTATGACAAGGACACCCCTGATCGTTGGTACAATGTTGCCAACGCTGTGGGTGGGAACAAAACTCCGGAGGAAGTGAAGAGGCACTACGAGCGCCTTGTCCAGGATGTCAAGTACATTGAGTCAGGGCAAGTCCCATTCCCTTACAAGAAAAATTCAGGCTCTGAGGAAGAGAAAAGGCTTAAGAACCTGAAGCTCCAGTGA 279 0.5018 MASSSMSASGSWSAKDNKAFERALAVYDKDTPDRWYNVANAVGGNKTPEEVKRHYERLVQDVKYIESGQVPFPYKKNSGSEEEKRLKNLKLQ* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2141 92 SMART sant 8 61 IPR001005 -
Dod01g2141 92 Gene3D - 2 72 - -
Dod01g2141 92 SUPERFAMILY Homeodomain-like 10 67 IPR009057 -
Dod01g2141 92 ProSiteProfiles Myb-like domain profile. 4 59 IPR001005 -
Dod01g2141 92 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 1 92 - -
Dod01g2141 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 92 IPR044636 GO:0003700
Dod01g2141 92 ProSiteProfiles SANT domain profile. 7 63 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2141 Dod-Chr1 58165413 58166172 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod01g2141 Myb_DNA-binding 2.1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2141 - - gmx:100804396 163.31