Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2129 ATGAGACGAAGGTATTTTTATCTCTGCAATCAAATGCAGCATTTGTTCGAGTCAATTCAAAGGGATTTGTCAAATGTGAAGCTCAAACACAAGGTTGCTAATCCTAGCATACATTATAATACTTCTAAATTGGGTGGTCTATCTAAAGAATATGCAGTTTTAAAGGATATAATTTCTTCATCAGTGAAAGATGCTTTATCAAGTTTTGGTTTACGAACTACAAGAGGAGTCCTTCTTCATGGTCCACCTGGTACAGGGAAGACTTCCCTGGCTCAATTATGTGCTCATGATGTTGGGGTAAATTTTTTCCAAGTAAATGGACCTGAAATTGTAACCCAGTATTTTGGGGAAAGTGAGCAAGCATTGCATGAAGTTTTTGATTCAGCCATTCAAGCTGCACCTTCTGTGGTATTCATCGATGAATTAGATGCAATTGCCCCTGCAAGGAAAGATGGAGGTGAAGAGTTATCTCAAAGAATGGTAGCGACCTTATTAAATCTGATGGATGGAATTGGTAGAACTGAAGGGTTACTTGTAATTGCTGCCACCAACAGGCCTGACCATATTGAGTCGGCTCTCAGACGACCTGGAAGATTTGACAAAGAAATTGAAATTGGCGTGCCATCCCCCAAACAGCGATTGGATATTTTGCTCACTATTCTTAGTGAAGTGGATCACTCTCTCTCAGATTTACAAGTTGAACACCTTGCCACTGTCTCTCATGGTTTTGTGGGTGCTGATCTGGCTGCCCTTTGTAATGAGGCGGCACTGATTTGTCTAAGACGTTATGCTAATTTTAAGAAGAGTTGCGATTCTTGTTCTAGTAACAAAACAGAGCAAACCGCACTATTGAATGGTGCAACTAATTCGAGAGATCATTCAGGTTTTGCAACTTCTACTGTTTCAGAATCAGATATTTCTGTGGCCTCCAATGCTGTATTACCTTCCTCCATGATGGAAACGACTTCAGAATTTATGGAAATAATTTCTGATAGTGATGAACAAGAGCACATTTTGAAAGTAAGTTTTGAAGATTTTCAGAAGGCCAGGATGAAAATAAGGCCTAGTGCCATGAGAGAGGTAATCCTTGAGGTTCCAAGGGTCAATTGGGAAGATGTAGGTGGTCAAAAGGAGGTCAAAGCTCAATTGATGGAAGCAGTAGAATGGCCCCAGAAGCACAGTGATGCATTCAACCGAATTGGGACTCGCCCTCCTACAGGTGTATTGTTGTTTGGGCCTCCAGGTTGTAGCAAAACCCTCATGGCACGAGCAGTTGCTTCTGAAGCAGGGCTGAACTTTCTAGCTGTCAAGGGTCCTGAACTCTTCAGCAAATGGGTTGGTGAATCAGAGAAGGCTGTCAGATCACTGTTTGCAAAAGCAAGGGCCAATGCCCCATCCATTGTATTTTTTGATGAAATTGATAGTCTGGCTGTAACTCGTGGGAAGGAAAGTGATGGTGTTTCAGTGTCAGATAGGGTCATGAGTCAGCTTCTTGTTGAATTGGATGGTCTGCATCAGAGAGTTAACGTAACTGTCATTGCTGCTACAAATAGACCAGATAAGATTGATCCGGCCCTTTTAAGACCAGGACGCTTTGACCGTCTGCTATATGTTGGACCTCCAAATGAGATAGACAGAGAAGAGATCTTTCGCATTCATTTGCATAAAATTCCATGTGGTTCTGATGTTAGCATTAAAGAACTGGCTCATCTCACAGATGGTTGTACTGGGGCTGACATATCATTAATATGTCGGGAGGCAGCTGTTGCAGCGATTGAGGAGAGCCTTGATGCTTCTGTTATAACAATGAAGCATTTAAAAATGGCAATCGAACAGATCCAGCCATCAGAAGTCTTGTCCTACCAAAAGCTGTCAACAAAGTTTCAGAGGGCTGTCCGCAGCTGTGACTTAATAGATGAATCCAATCAGATGCAGCCCAAAAGTGGATTTACTTCGTTCAACAAGTGGAAGTTCGTAAAATGTTGCACATTCTTCCTCTGTATTCCTGCAGTCCTCCTTTATTTGAGGACCATTAGAAGTGGTTAA 2046 0.4198 MRRRYFYLCNQMQHLFESIQRDLSNVKLKHKVANPSIHYNTSKLGGLSKEYAVLKDIISSSVKDALSSFGLRTTRGVLLHGPPGTGKTSLAQLCAHDVGVNFFQVNGPEIVTQYFGESEQALHEVFDSAIQAAPSVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGIGRTEGLLVIAATNRPDHIESALRRPGRFDKEIEIGVPSPKQRLDILLTILSEVDHSLSDLQVEHLATVSHGFVGADLAALCNEAALICLRRYANFKKSCDSCSSNKTEQTALLNGATNSRDHSGFATSTVSESDISVASNAVLPSSMMETTSEFMEIISDSDEQEHILKVSFEDFQKARMKIRPSAMREVILEVPRVNWEDVGGQKEVKAQLMEAVEWPQKHSDAFNRIGTRPPTGVLLFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIVFFDEIDSLAVTRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNEIDREEIFRIHLHKIPCGSDVSIKELAHLTDGCTGADISLICREAAVAAIEESLDASVITMKHLKMAIEQIQPSEVLSYQKLSTKFQRAVRSCDLIDESNQMQPKSGFTSFNKWKFVKCCTFFLCIPAVLLYLRTIRSG* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2129 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 265 IPR027417 -
Dod01g2129 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 366 619 IPR027417 -
Dod01g2129 681 Gene3D - 541 614 - -
Dod01g2129 681 Pfam ATPase family associated with various cellular activities (AAA) 77 206 IPR003959 GO:0005524|GO:0016887
Dod01g2129 681 Pfam ATPase family associated with various cellular activities (AAA) 408 539 IPR003959 GO:0005524|GO:0016887
Dod01g2129 681 Pfam AAA+ lid domain 230 263 IPR041569 -
Dod01g2129 681 Pfam AAA+ lid domain 562 607 IPR041569 -
Dod01g2129 681 Gene3D - 26 208 IPR027417 -
Dod01g2129 681 CDD AAA 71 206 - -
Dod01g2129 681 Gene3D - 209 355 - -
Dod01g2129 681 Gene3D - 365 615 IPR027417 -
Dod01g2129 681 PANTHER AAA-FAMILY ATPASE 41 638 - -
Dod01g2129 681 PANTHER - 41 638 - -
Dod01g2129 681 CDD AAA 374 540 - -
Dod01g2129 681 ProSitePatterns AAA-protein family signature. 510 528 IPR003960 GO:0005524|GO:0016887
Dod01g2129 681 SMART AAA_5 73 209 IPR003593 -
Dod01g2129 681 SMART AAA_5 404 542 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2129 Dod-Chr1 57955735 57963278 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2129 42 666 Calmodulin-binding Proteins AT3G56690 68.075 0.0 825
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2129 - - gmx:100788600 1095.49