Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2108 ATGGAGTATCTCACAAGCCTCGCAACTGAAGCTGTCTCAAAACTTGGAGCTTTGGTGGTGGAATCTACTGTGAAGCAGTTCAAATATATGATCCGCAAGGACAAAATCATAGTCAATTTGAAGGAAGAGCATAAAAAATTGAAGGCTATGAAAGCAAATTTGGAGAGGATAGTAGATGCATATGGAAGGAATGGACGTGAAATTGGATCTGATGTGCAAGAGTGGCTCGACAAGGTGAAAGATGTTGATAATGAGCTAGAAAGATTATATGAAAATGAAGCCAAGAAGAACAAGAAGTGTTTTGGTATGAAGTGTCCAGATTTGGCATTCAATTACTCAATGGGAAATCAAGCCACTAAAAAGGCACAAGATATTGCAAGTTTAAAGGAGGAAGAGAACAGGTTCAAGCTCATACCCTGCCCCAAATCTCCACCAAGACTTGGATCTTTAATCACAGAACACATCATAGCCTTGGAGTCAAGAAAAGCAATTTCGAAGAGTGTCATGGAGAAATTGAAAGATGAAAGGATCAAAAGGATTAGCATTTGTGGGATGGGTGGAGTGGGAAAAACCACATTAGTGAACGAAGTAATACAAAACATAGAGACAACTGCATTATTTGATAAAGTTGTGATGGTGGTGGTGTCTCAAAAACCAGACTATGAGAAGATCCAAATTCAAATTGCTGATAGGTTACTTTTGGAGTTCAGAGCAAAGAGTATGCAAGAAAAAGCACTTGAATTGCACGAGAGAATGAATAGGGATAATAAACGAGTGCTAATAGTGCTAGATGATGTTTGGGACGAGCTTGATTTCAGGTGCATTGGACTTCCTTCCCTTGAACATCAAAAGGGTTGCAAAATATTATTCACATCACGAAATGCAAAAGTGTGCCAAAATATGGGAAGTCAAGAGGATATTATAGTTCCTGTTTTGTCTGAAGATGAAGTGTGGTATCTATTTCGGGATATGGCAGGTGATGTTGTCGATTTGCCTAATATCCTCCACATAGCAAAAGAGGTTGCAAAGGAATGCGGAGGATTGCCCCTTGCTCTTGTGACTGTTGCGAGAGCACTTGGGAAAGAAGAAAAGCCTATGTGGGAAGATGCACTTGAACAATTAAGAAACTCTCCATCATCTTCCTTTTCAGATGTGCAAAAACTGGTGTACTCGCGCATTGAGCATAGTGTTAACTTTCTAAGCAGTGAAGAGAAAAAATGGTGCCTTTTACTTTGTGGCTTGTTTCCTGAAGACTTTGACATTCCTATTGAGAGTTTGCTGCGTCTTGGAATGGGGTTGGGAATGTTCAGAGTTGATGGTGCACTAAGGAAAACAAGAAACCTGGTGCACACTTCCATAGGCCATCTAAAGATCAGAGGTGCTTCTTGTTGTTGGATAGCGGCGAGCCTGGCACAATATGGGCTTATAGTACAATATAATGCTGAATTGAAGAGTCCAAAAGAAGGGAACTTGGATCATATCAAAGCAATATCTCTTCTTTTGGATGAGACAAAGGGATTAAAGAATGGCTTAAAGTATCCAGAACTTCAACTTTTGCAAGTACGGTCAAAGAGCAAGGAGCCGAATCCGTGGCCTGAGCATTTCCTCCGAGGCATGAATAAGCTCAAAGTCTTAGCTATGGAAAATTTGAGTATTCCAACCCTTCCATCACTTTTCCAAGCCTCAGCCAACCTCCATACATTGCAAGTAGAATATTGCGATGTTGGAGATATTTCAGTCATTGGTAAGGAACTTAAAAGACTAGAGGTCCTAAGCTTTGCACAGTCAAATATCAAAGAACTTTCAACTGAAATTGGCGAGCTAGGCTTTCTTAAGTTATTGGATTTGACAGGATGTAATGATCTTTACTTTATCCCTACTAATGTATTGAGAAGATTATCTCGGTTGGAAGAACTTTACTTCAAGGTTCAAAATTTTCCTTGGGCGCACCACAAAGACGTTCTCATGGAGTTACAAAGTATATCTAATCATTTGAAGGTTATTGAGTTCAAAGTGAAGAAGCTTGAAATTTTACCGAAAGATTTGACATTCAAAAACTTAGAAAGATTTGGGGTATATGTAGTTCCTGCTGAAATGGATGTTGATCATGTTGGATATTCAGATTCAAACATATTACTAATCACTAATGAAAATTCCAAGTCTATGAAATGTAGTTTGATGATCAAGGAATTGGTTAAGAAGTGTGAAGCTCTTGTATTGCTAAATGTGAAAGACTTGAAGAATTCCTTGTCTTTGTACTATCTTGATAATTTAAGAGAGATATGCAATGTATCTGATCACTATGATAAGGAACTGACAATCAAATTCTTAAATTTGGTGGAATTGAAGTTAGATTCTCTGCCATGCTTAACTGGCTTTAGCAAAGCCATTGATTTGAATGAGTCCGCTCAACCAATTAAAGATGAACCTCAACCTGGATTGAGTCAATCAGCCAAGTTAACGATGGATGGGGATGACCAAATGTTACCTAGATCCTATGCAGAAGCAAGGGATCATAAACTTTTGCCGGCCACTGGGAAGTTATTTTCAACTAAATGGATGCAGCAGTTCCCAAAGCTGGAAAATCTCGAGCTAGCGACTTGCGCATCTTTAGAGATGATATTTGACTTGCAAGGAAACTGA 2643 0.3897 MEYLTSLATEAVSKLGALVVESTVKQFKYMIRKDKIIVNLKEEHKKLKAMKANLERIVDAYGRNGREIGSDVQEWLDKVKDVDNELERLYENEAKKNKKCFGMKCPDLAFNYSMGNQATKKAQDIASLKEEENRFKLIPCPKSPPRLGSLITEHIIALESRKAISKSVMEKLKDERIKRISICGMGGVGKTTLVNEVIQNIETTALFDKVVMVVVSQKPDYEKIQIQIADRLLLEFRAKSMQEKALELHERMNRDNKRVLIVLDDVWDELDFRCIGLPSLEHQKGCKILFTSRNAKVCQNMGSQEDIIVPVLSEDEVWYLFRDMAGDVVDLPNILHIAKEVAKECGGLPLALVTVARALGKEEKPMWEDALEQLRNSPSSSFSDVQKLVYSRIEHSVNFLSSEEKKWCLLLCGLFPEDFDIPIESLLRLGMGLGMFRVDGALRKTRNLVHTSIGHLKIRGASCCWIAASLAQYGLIVQYNAELKSPKEGNLDHIKAISLLLDETKGLKNGLKYPELQLLQVRSKSKEPNPWPEHFLRGMNKLKVLAMENLSIPTLPSLFQASANLHTLQVEYCDVGDISVIGKELKRLEVLSFAQSNIKELSTEIGELGFLKLLDLTGCNDLYFIPTNVLRRLSRLEELYFKVQNFPWAHHKDVLMELQSISNHLKVIEFKVKKLEILPKDLTFKNLERFGVYVVPAEMDVDHVGYSDSNILLITNENSKSMKCSLMIKELVKKCEALVLLNVKDLKNSLSLYYLDNLREICNVSDHYDKELTIKFLNLVELKLDSLPCLTGFSKAIDLNESAQPIKDEPQPGLSQSAKLTMDGDDQMLPRSYAEARDHKLLPATGKLFSTKWMQQFPKLENLELATCASLEMIFDLQGN* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2108 880 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 409 IPR027417 -
Dod01g2108 880 Gene3D Ribonuclease Inhibitor 517 880 IPR032675 -
Dod01g2108 880 SMART AAA_5 176 322 IPR003593 -
Dod01g2108 880 Coils Coil 72 99 - -
Dod01g2108 880 PRINTS Disease resistance protein signature 606 622 - -
Dod01g2108 880 PRINTS Disease resistance protein signature 179 194 - -
Dod01g2108 880 PRINTS Disease resistance protein signature 345 359 - -
Dod01g2108 880 PRINTS Disease resistance protein signature 253 267 - -
Dod01g2108 880 Gene3D - 152 309 IPR027417 -
Dod01g2108 880 PANTHER - 7 748 - -
Dod01g2108 880 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 7 748 - -
Dod01g2108 880 Coils Coil 37 60 - -
Dod01g2108 880 Gene3D - 311 394 IPR042197 -
Dod01g2108 880 SUPERFAMILY L domain-like 441 793 - -
Dod01g2108 880 Pfam NB-ARC domain 166 397 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2108 Dod-Chr1 57602890 57606330 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2108 158 627 WRKY Transcription Factor Family AT5G45050 26.181 3.75e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2108 - - lja:Lj1g3v4058580.1 815.839