Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2101 ATGGACCAACAGCACCGCCACGTCAGCAGCAGCGGAGCCAACGATCCCATGCTCCGCAACCCCACCGTACGCCCCACCCCCACCACCACGACAACCTCCTTCTCTCTACCCCTAGCTCGCTACACCTCCCGCCTCATCGCCGCCGACCACCGCCGCATGCTCCTCGCCGACTGCGCAGACCGCCGATCCGACGACGGCGACCTCACCGAGGACGACGACGGCGGCGGCGGAGTAGGATGCGCGTACTCGAGGCCGGTGCTTGTCCTCGACCTCGTGTGGAACCTGGCGTTCGTCGTGGTCGCCGCCGGCGTGCTCCTCTCGACGCTCCGGGAGCGGCCGGCGACGCCGCTGAGGCTGTGGCTCTGCGGGTACGCGTTCGAGTGCGTGGTCCACATGTGCTTCGTGTACTTCGAGTATCGCAGGAGAATCGGCGATTCCTCGCTGTCTCAGCGTCCCTACAGCATTGTGAAGAAGTTAGAGCCAATGAACACTCTGGCATCATCTGTCTGGTGGGTTTTTGGGTTTTACTGGATTGTTATGGGCGGCCAAGCACTTTTGGAAGATTCTCCACGTCTTTACTGGTTAACAGTGGTATTTCTAGCCTTTGACGTGTTTTTTATTATCTTTTGCATTGGGATGGCTTGTATAATATTTTTTGCTCTCTTCTGCCTCATCCCAATAATAGCATTAGCTTATGCTATAAGAATCAGAGAAGGTGCATCAGAAGAGGATATCGGATCACTTCCTAAGTATAGGTTTAGTCAGTCAAATTCATTGGTGATGGTTGATGACACCAAGAAGCAACTTGTGAAAGCAAGAAGGGATTCATGCAATGAAAATCATATCAGTGAACTTTTTCTCCATCCAGATGATTCTGAATGCTGTATCTGCCTATCCCCATATGTTGATGGAGCAGAATTGTATCGCCTTCCCTGTACCCACCATTTTCATTGTGGATGCATCAGCCGTTGGCTTCGAACAAAAGCAACTTGTCCACTCTGCAAATTTAATATCCTTAGAGGTGATACATTGGTCTGA 1038 0.5241 MDQQHRHVSSSGANDPMLRNPTVRPTPTTTTTSFSLPLARYTSRLIAADHRRMLLADCADRRSDDGDLTEDDDGGGGVGCAYSRPVLVLDLVWNLAFVVVAAGVLLSTLRERPATPLRLWLCGYAFECVVHMCFVYFEYRRRIGDSSLSQRPYSIVKKLEPMNTLASSVWWVFGFYWIVMGGQALLEDSPRLYWLTVVFLAFDVFFIIFCIGMACIIFFALFCLIPIIALAYAIRIREGASEEDIGSLPKYRFSQSNSLVMVDDTKKQLVKARRDSCNENHISELFLHPDDSECCICLSPYVDGAELYRLPCTHHFHCGCISRWLRTKATCPLCKFNILRGDTLV* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2101 345 PANTHER TARGET OF ERK KINASE MPK-1 28 345 - -
Dod01g2101 345 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 287 343 IPR013083 -
Dod01g2101 345 Pfam Ring finger domain 293 335 IPR001841 -
Dod01g2101 345 MobiDBLite consensus disorder prediction 1 32 - -
Dod01g2101 345 ProSiteProfiles Zinc finger RING-type profile. 294 335 IPR001841 -
Dod01g2101 345 PANTHER RING-FINGER UBIQUITIN LIGASE 28 345 - -
Dod01g2101 345 SUPERFAMILY RING/U-box 286 339 - -
Dod01g2101 345 SMART ring_2 294 334 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2101 Dod-Chr1 57502516 57507867 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2101 9 342 C3H Transcription Factor Family AT1G68070 43.626 1.70e-93 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2101 - - ahf:112696795 570.081