Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2072 ATGGAAGAGCAGGGCCAGCAGCATGACCAAAACAGAAGTAGCCCTCCAAGCCATCAACATCCCCCCGAGAAGAGCGAGCCGGTGAGGTCAAGGTGGACTCCAAAACCGGAGCAAATCCTCATCCTCGAGTCCATCTTCAACAGCGGCATGGTCAACCCTCCCAAAGACGAGACCGTCAGGATAAGGAAGCTTCTAGAGAAGTTCGGCGCCGTCGGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGACGGTCCAGATCTCGCCGCCGCCAGCGCCAGATGCAGCAGGCCACACAACAGCAACAGCAACAGCAGCAGCAGCAGCAATTGCTTCAACTTGGTGGTGGTGCAATTCTGTGTGATCAGGCTCATGGTAGCCATCCTGCACCTGCGGCGGTTTCAGCAAGCGTTGGTTTTGGTGGTGGTGGTGGTTCTTGTTCCTCTTCTTTTGGTGATTCTTCTTCTTCTCTTGCTTATCTACCTGCTGGTTCGTCTTCTTCTTCTTCGTCTTGTGGTGGTGGCCAAGATCAAGGGGTAGTAGTGGATGGCTTCTTCTCTGTCCCTCCTCAAATGGGGTTCCCTGAAATTGATCACACTTCACCTGGAACATCGGTTTTGTACCCTCATGTTGCTCCAAATTTGAACTTCCAGCCTGGATTTGGGGGGAATAATATTTCAGGATTCATCACAGTGCTTATCAATGGGATTGCAACAGAAGTTCCAAGGGGCCCAATAGACATCAAAACATTGTTTGGTGAAGATGTTATTTTAGTTCATTCCTCTGGAGTGCCAGTTCCCACCAATGAATTTGGCTTCTTGGTGCAGAGCTTGCACCATGGGGAAAGCTACTTTCTGGTTCCAAAGCCAGCACAAGCATGA 879 0.5097 MEEQGQQHDQNRSSPPSHQHPPEKSEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGAVGDANVFYWFQNRRSRSRRRQRQMQQATQQQQQQQQQQQLLQLGGGAILCDQAHGSHPAPAAVSASVGFGGGGGSCSSSFGDSSSSLAYLPAGSSSSSSSCGGGQDQGVVVDGFFSVPPQMGFPEIDHTSPGTSVLYPHVAPNLNFQPGFGGNNISGFITVLINGIATEVPRGPIDIKTLFGEDVILVHSSGVPVPTNEFGFLVQSLHHGESYFLVPKPAQA* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2072 292 PANTHER WUSCHEL-RELATED HOMEOBOX 11 7 288 - -
Dod01g2072 292 Coils Coil 87 107 - -
Dod01g2072 292 PANTHER WUSCHEL-RELATED HOMEOBOX 11 7 288 IPR044558 GO:0003700|GO:0048830
Dod01g2072 292 Pfam Homeodomain 29 89 IPR001356 GO:0003677
Dod01g2072 292 SUPERFAMILY Homeodomain-like 22 96 IPR009057 -
Dod01g2072 292 MobiDBLite consensus disorder prediction 92 108 - -
Dod01g2072 292 ProSiteProfiles 'Homeobox' domain profile. 25 90 IPR001356 GO:0003677
Dod01g2072 292 MobiDBLite consensus disorder prediction 87 108 - -
Dod01g2072 292 Gene3D - 29 97 - -
Dod01g2072 292 SMART HOX_1 27 94 IPR001356 GO:0003677
Dod01g2072 292 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2072 Dod-Chr1 56915489 56917756 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2072 1 286 Wox Gene Family AT3G03660 50.842 1.76e-66 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Dod01g2072 Homeodomain 1.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2072 - - adu:107494279 276.944