LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod01g2062	ATGGTTTTCTCACCAGAGGACCAGATTCTTGTGGGTGTGGCCGTTGCTGTTGTGGCCATTGGTGTTGGTGCTTTCTACCTCTACGCATCCAAGAAGTCCAAAGTTGGCTTGGACCCGGAGAATTTCAAGAAGTTTAAGCTCACCAAGCGTCAACAGCTTAGCCATAATGTTGCAAAGTTCACATTTGATCTTCCAACACCTACTTCTGTTTTGGGCCTTCCAATTGGGCAACACATAAGTTGCAGGGGTAAGGATGCCAATGGTGATGAGGTTGTCAAACCATATACCCCTACTACTCTGGACTCTGATGTTGGATATTTTGAACTCGTCATTAAGATGTACCCACAAGGAAGGATGTCACACCATTTCCGTGAGATGCGTGTTGGTGACTATCTTGCTGTGAAAGGACCCAAGGGACGTTTCAAGTACCAACCTGGTGAAGTTAGAGCATTTGGGATGCTTGCTGGAGGGTCTGGAATCACTCCAATGTTCCAAGTTGCTAGAGCTATACTAGAAAACCCACAAGACAGGACCAAGGTGCATCTTATCTATGCCAATGTTACATACGAGGACATTCTATTGAAGGAAGAACTTGATAGTCTTGCTACTAACCATGCAGATCGGTTCAAAATATACTATGTCTTAAATCAGCCTCCAGAAGTATGGGACGGTGGTGTCGGGTTTGTGTCAAAGGAGATGATTCAAACCCATTGCCCTCAACCGGCAAATGATATTAAGATATTAAGATGCGGTCCGCCACCGATGAACAAGGCCATGGCTGGTCACCTTGAGGCCCTTGGATATGCACCTGAGATGCAGTTCCAGTTCTGA	831	0.4585	MVFSPEDQILVGVAVAVVAIGVGAFYLYASKKSKVGLDPENFKKFKLTKRQQLSHNVAKFTFDLPTPTSVLGLPIGQHISCRGKDANGDEVVKPYTPTTLDSDVGYFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFKYQPGEVRAFGMLAGGSGITPMFQVARAILENPQDRTKVHLIYANVTYEDILLKEELDSLATNHADRFKIYYVLNQPPEVWDGGVGFVSKEMIQTHCPQPANDIKILRCGPPPMNKAMAGHLEALGYAPEMQFQF*	277

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod01g2062	276	Pfam	Oxidoreductase FAD-binding domain	45	143	IPR008333	-
	Dod01g2062	276	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	7	276	IPR001834	GO:0016491
	Dod01g2062	276	CDD	cyt_b5_reduct_like	45	276	-	-
	Dod01g2062	276	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	190	201	IPR001709	GO:0016491
	Dod01g2062	276	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	152	171	IPR001709	GO:0016491
	Dod01g2062	276	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	246	254	IPR001709	GO:0016491
	Dod01g2062	276	Gene3D	Translation factors	32	134	-	-
	Dod01g2062	276	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	7	276	-	-
	Dod01g2062	276	SUPERFAMILY	Ferredoxin reductase-like, C-terminal NADP-linked domain	132	272	IPR039261	-
	Dod01g2062	276	Gene3D	-	135	276	IPR039261	-
	Dod01g2062	276	ProSiteProfiles	Ferredoxin reductase-type FAD binding domain profile.	40	144	IPR017927	GO:0016491
	Dod01g2062	276	SUPERFAMILY	Riboflavin synthase domain-like	37	145	IPR017938	-
	Dod01g2062	276	Pfam	Oxidoreductase NAD-binding domain	153	259	IPR001433	GO:0016491
	Dod01g2062	276	PRINTS	Cytochrome B5 reductase signature	93	100	-	-
	Dod01g2062	276	PRINTS	Cytochrome B5 reductase signature	129	143	-	-
	Dod01g2062	276	PRINTS	Cytochrome B5 reductase signature	71	82	-	-
	Dod01g2062	276	PRINTS	Cytochrome B5 reductase signature	246	254	-	-
	Dod01g2062	276	PRINTS	Cytochrome B5 reductase signature	190	201	-	-
	Dod01g2062	276	PRINTS	Cytochrome B5 reductase signature	152	171	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod01g2062	Dod-Chr1	56769738	56775343	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod01g2062	25	276	NADPH P450 reductases	AT5G17770	84.524	1.33e-165	458

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod01g2062	K00326		-	gmx:100816447	494.197