Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2019 ATGGGTTTCACCTTGTTCCTCAACGCCTCTTTCCTCATGGTTTTCTGTGCTTTCCTTGCTGTTCATTTCCACTCTTCAGAGCATGTTGCTCCGACCAAACACTTCGCCTACGGTTATGGTGGCAGTAGTGAGAAAGGTTGCAAGGATTTACATAGCCTGAGTGATTACAAAGAGAAGTGCTTGTACCTGAAATCCAGTGACCCTTGTGTCACTCAGGGCTATATTGACTACCTTTATCTGTTCTACTGCAAATTTGGGGAATTTCCTCTATTGGGTCATAGCCTTTTGTTTCTTTGGTTATTGGTTTTGTTCTATGTGCTGGCCAATACAGCTTCTGAATACTTTTGTCCTTCTCTTGAGAACCTGTCAAAATTGCTCAGGCTATCCCCAACAATTGCTGGAGTGACCCTTCTCTCCGTTGGCAATGGTGCCAGTGATGTTTTTGCCACCCTTGTCTCTTTCAATAGCAGTGGGACCCGCAGCATTGGCTTCAACACTGTGCTTGGTGGTGCTTCCTTTGTGTCCTGTGTTGTGGTTGGGATAGTGAGCATCTCAGTTCGTCATAGGGGAATTCAGGTTAAGAAGTCTGCCCTGATAAGGGATGTTTGTTTCCTTCTCTTTGTTCTTTTGTGCTTGTTCGCCATTTTGATCGCTGGCGAGATCAATGTTCTCGGTGCAATTAGCTTTTCCTTGATGTATGTACTGTATGTGGTTATTGTTTATGTCTCATCCACCCGGTGGAAGGGTGTATGTGGAGATGCTGAAGGTGATGGTGAATCAAGAAATGGCTGTGATTTGGATGTGCCCCTTCTCAATGGTATGGAGAAAGGACTAATTGGTAGTGCTGAAAATGGGGCTCAAGGATGTGGCTTGAACATTGAGAAGAATTGTTGCTGCCAGAAATATTCAATATGTGGAATGTCACTTTATGTCATGGAATTGCCCCTTTACTTGCCAAGGAGATTGACAATTCCTGTTGTTTGTGAAGAGAGATGGTCCAAACCATGTGCAGTTTCTTCAGCTATGTTAGCACCACTACTATTGTCTTCTCTGTGGATCCCAGGTAATAAGGAAGACAGTTTCTTCAACTCAAGCCTTATAGTCTATGGAATTGGATTAATGGTAGGAATTGTGTTAGGGGTAGCTGCATTTGTTACAACCGAGGTGTCAAACCCACCAAGGAAGTACTTGTTCCCTTGGCTAGCAGGAGGGTTTATCATGAGTGTTACATGGAGCTACATTTCAGCTCAGGAATTGGTGGGGTTGTTGGTTTCACTTGGTTACATTAGTGGAGTGAGTCCTTCAATTCTGGGGTTAACAGTTCTTGCATGGGGAAATTCACTTGGGGACTTGGTGACAAATTTGACAATGGCTTTACATGATGGAACAGCAGGTGCTCAAATTGCAATAGCAGGCTGTTATGCTGGCCCAATATTCAATACAGTGGTTGGATTAGGTTTATCTCTTGTATGCTTTACATGGTCAGAGTATCCATCTTCTGTTGTGATTCCAAGAGATCCGTATCTGTGGGAGACATTGGCACTTTTGGTGGTTGGATTGATTTGGGCACTTGTGGTCTTGATGAGAAGAGACATGAGGCTTGATGCACTCTTAGGAGGAGGGCTTCTAGTTGTTTACTTCATTTCTGTTCTCTTGAGGCTGATTCAGGCATTGGAGTCTCACCAATTTCAAAGTATGTTAGGCTTGGTATTCAAAAGATGGTAA 1725 0.4365 MGFTLFLNASFLMVFCAFLAVHFHSSEHVAPTKHFAYGYGGSSEKGCKDLHSLSDYKEKCLYLKSSDPCVTQGYIDYLYLFYCKFGEFPLLGHSLLFLWLLVLFYVLANTASEYFCPSLENLSKLLRLSPTIAGVTLLSVGNGASDVFATLVSFNSSGTRSIGFNTVLGGASFVSCVVVGIVSISVRHRGIQVKKSALIRDVCFLLFVLLCLFAILIAGEINVLGAISFSLMYVLYVVIVYVSSTRWKGVCGDAEGDGESRNGCDLDVPLLNGMEKGLIGSAENGAQGCGLNIEKNCCCQKYSICGMSLYVMELPLYLPRRLTIPVVCEERWSKPCAVSSAMLAPLLLSSLWIPGNKEDSFFNSSLIVYGIGLMVGIVLGVAAFVTTEVSNPPRKYLFPWLAGGFIMSVTWSYISAQELVGLLVSLGYISGVSPSILGLTVLAWGNSLGDLVTNLTMALHDGTAGAQIAIAGCYAGPIFNTVVGLGLSLVCFTWSEYPSSVVIPRDPYLWETLALLVVGLIWALVVLMRRDMRLDALLGGGLLVVYFISVLLRLIQALESHQFQSMLGLVFKRW* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2019 574 Pfam Sodium/calcium exchanger protein 401 553 IPR004837 GO:0016021|GO:0055085
Dod01g2019 574 Pfam Sodium/calcium exchanger protein 97 241 IPR004837 GO:0016021|GO:0055085
Dod01g2019 574 PANTHER CATION CALCIUM EXCHANGER 1 561 - -
Dod01g2019 574 Gene3D - 341 554 IPR044880 -
Dod01g2019 574 Gene3D - 128 253 IPR044880 -
Dod01g2019 574 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 1 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2019 Dod-Chr1 56046849 56050343 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2019 1 561 Antiporters AT5G17850 51.748 3.78e-164 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2019 K13754 - gmx:100787016 745.732