Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2018 ATGGCACCCTTCATCTCCAGCTCCAAATCTCAACCCACAAAATTCACTCTTCTCCTGAACACATCTTTCACCTTCCTTCTCTGCCTCCTTCTAAAAGCCTATCTCAACCCCTCCACCTCAAATTTTTATGGCCATTCCAATAATTTCCCCCTTACAAAAATCATCAACCATGCAAGATTGCTCAGTGACATCAGTGTTGATGGCTGCACTGACCTCCACAAGTATTCAGATTACAGCTCAAAGTGCTTCTATGTCAAGACTCATTCTGATTGCAGGTCAAAGGGGTACATAAACTATCTCCAAATCTTCTATTGCAGCCTTGGCCAGTCTCCAATTATTGGTCATGCACTCCTTGCCATTTGGCTGGTGGTGTTGTTCTATCTCTTGGGGGACACAGCTTCCAACTACTTTTGCAACAACTTGGAAGGCTTGTCCAACATCTTGAGGCTCTCTCCAACCATTGCAGGGGTAACCTTGCTCTCTCTTGGAAATGGTGCTCCTGATTTCTTTGCAAGTGTTGTTTCCTTCACAGGATCCAGCAATGGTGCAGTTGGCCTCAACAGCATTCTTGGAGGGGCTTTCTTTGTTTCCAGTGCTGTCATGGGGATCATAAGCATTCTTGTTAGCCCAAATCAGGTTTCAGTTGATAAGGCCAGTTTCATTAGGGATGTCATATTCTTCCTTTTCTCACTTCTTATCATCCTCATCATCATTTCCATTGGTAAACTCACCTTGTTGGGTTCAATATGTTATGTCTCCATCTACTTCCTTTATGTATGTGCTGTTTCTGCAACACATTTCATCTATGGAGGGGATAACAAAGAAAGGGGAGAATTTCCAGTGTCTTCATCAGATGACTCATCACTAGAATCTGGCATACCATTGCTGGGATATGTTGATGATGAGAAACCAAATCCAATGGAGAAAGTGGTTGCTGTTGTTGTTGAAGACAAGGAGGGAGAGTCAAGAAGTCTTGACAATGATTCATTTGACTGTAATTACTTAGCAAAGTTTCTACAGATACTAGAGTTACCTCTTTGCTTGCCAAGAAGGCTTACAATACCAGTGGTGAGTGAGGAGAAGTGGTCCAAGCCATATGCAGTTATATCTGTCACATTAGCACCAGTTTTGTTGGCAGCAGTTTATAACACACAGACGGAAAATGTGAGTTCAAGGAGCAGCCTAGTTACCTATTTGATAGCTGCTTTGATTGGCATAGTTTTGGGGAATATGGCATGTGTCACAACAAAGAGCTGTAGCCCACCAAGGAAGTGCTTGTTTCCTTGGCTAGCGGGTGGTTTTACTATGAGTGTAACATGGACTTACATCATTGCTGAGGAGCTTGTTTCCCTTTTGGTCTCAATTGGGAACATCATTGGGGTTAGCCCTTCAGTCCTTGGGCTAACTGTCCTAGCTTGGGGTAACTCCCTTGGGGACTTGATAGCAAATGGTGCAATGGCAATGAATGGTGGGGCAGATGGTGCACAAATGGCTATATCTGGCTGCTATGCTGGTCCTATGTTCAATACTTTGATGGGTTTGGGCTTGCCCCTTGTTCTATCATGCTTTGTCTGA 1575 0.4375 MAPFISSSKSQPTKFTLLLNTSFTFLLCLLLKAYLNPSTSNFYGHSNNFPLTKIINHARLLSDISVDGCTDLHKYSDYSSKCFYVKTHSDCRSKGYINYLQIFYCSLGQSPIIGHALLAIWLVVLFYLLGDTASNYFCNNLEGLSNILRLSPTIAGVTLLSLGNGAPDFFASVVSFTGSSNGAVGLNSILGGAFFVSSAVMGIISILVSPNQVSVDKASFIRDVIFFLFSLLIILIIISIGKLTLLGSICYVSIYFLYVCAVSATHFIYGGDNKERGEFPVSSSDDSSLESGIPLLGYVDDEKPNPMEKVVAVVVEDKEGESRSLDNDSFDCNYLAKFLQILELPLCLPRRLTIPVVSEEKWSKPYAVISVTLAPVLLAAVYNTQTENVSSRSSLVTYLIAALIGIVLGNMACVTTKSCSPPRKCLFPWLAGGFTMSVTWTYIIAEELVSLLVSIGNIIGVSPSVLGLTVLAWGNSLGDLIANGAMAMNGGADGAQMAISGCYAGPMFNTLMGLGLPLVLSCFV* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2018 524 Gene3D - 150 275 IPR044880 -
Dod01g2018 524 Gene3D - 367 523 IPR044880 -
Dod01g2018 524 PANTHER CATION/CALCIUM EXCHANGER 1 5 522 - -
Dod01g2018 524 Pfam Sodium/calcium exchanger protein 430 521 IPR004837 GO:0016021|GO:0055085
Dod01g2018 524 Pfam Sodium/calcium exchanger protein 119 261 IPR004837 GO:0016021|GO:0055085
Dod01g2018 524 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 5 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2018 Dod-Chr1 56026286 56028609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2018 67 521 Antiporters AT5G17860 51.852 2.14e-152 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2018 K13754 - gmx:100811635 722.62