Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2002 ATGGCAAATAAAACTCATCCTTCAGTGTTTCTGGTGTTGGTCAGTATTTTGCTTTGTGTCTGTCATTCAGAGCAAAGGCAATCCTCCCGCACTCTGACCCTTCTGAGAATTCAACAGCTATTGGACTTTCCTGTTGCTTTAAGCAGCTGGAATAGCCACACAGACTTTTGCAGAACAGAGTCAAACTCTTCTCTCACTGTGGTATGCTATGAAGGCAACATAACACAACTGCACATAATAGGTGACAGAAGAGCTCCACTTCCTAAGAATTTCTCAATGGATTCCTTTGTCAAAACACTGGCAAGGCTTCCTAGTTTGAAAGTTCTCACATTGGCTTCTCTTGGTATGTGGGGTCCATTGCCTGCTAAGATTGCTGGTTTGCCATCACTGGAAATTGTTAATGTAAGTTCCAATTTTCTGTACGGTTCCATCCCTCACGAGCTTTCGTCTCTGTCGAATCTCCAAACACTCATTCTTGACAACAACATGTTTTCCAGCCGGCTTCCTGATTGGCTTGATTCACTTCCAGCCTTAACCGTGTTAAGTTTGAAGAACAATTTGTTCAATGGAACTCTACCAAATTCGCTTGGTAGCTTGGAGAATTTGAGAATTCTTTCACTTTCCCATAATCACTTTTTCGGGTTAGTACCTGATTTGACCCTTTTGACAAATCTTCAAGTGCTGGAACTGGATGATAATGCTTTCGGACCGCAGTTTCCTCGGCTTGGTAACAAGTTGGTTACTCTAGTGCTAAGAAACAATAAGTTCAGGTCAGGTATCCCTGCTGAATTGATATCATATTATCAGCTCGACCGATTGGATATCTCGTCAAATAAATTTGTGGGGCCATTCCAGCCAGCATTGCTATCACTTCCCTCTATTACTTATCTGAACATTTCTGGAAACAGATTAACAGGGAAGCTTTTGGAGAATCTGTCTTGCAATTCTGAACTTGAAGCAGTGGATTTATCCTCAAATCTTCTGACTGGGAGCTTACCGAAATGTCTGATGTCGAATTCCAGTGGTAGGACTATGTTGTATGCTAGAAATTGTCTAGAGACAACAAATCAAAATCAGCAGCCAGCACCCTTTTGCCACACTGAAGCCTTGGCTGTGGGAATATTGCCTGAAAGAAAGAAGCACAAACAAGTGTCTAAGGTAGTTCTTTCCCTTGGCATAGTAGGTGGGACTCTTGGAGGAGTAGCACTTGTTTTGCTGATTTTCTTTGTTATCAGAAGAGGAAATGCCAAAAGCAAAATGAAGAATCCTCCAACCAGATTTATATCAGAGAATGCAGCTTCTGGATACACCTCTAAGTTGCTTTCTGAAGCTAGGTATATATCTCAAACAAAGAAGTTGGGAGCAGTTGGCCTGCCAAGTTATCGAAGTTTCTCATTGGAAGAGATTGATGCAGCTACAAACTACTTTGACACAGCTTCTTTAATGGGTGAAGATTCTCAATGGGAAGGTCAGCTGAAGAATGGTTCGCTTGTTGCTATAAGATGTGTGAAAATGAAAAAAAGCTACAGCACTCAAAACTTTACACACCACATAGAGTTGATATCGAAACTTAGGCATCGTCATTTGGTCAGTGCTCTTGGACACTGCTTTGAATGTTCTTTAGATGATTCAAGTGTCAGCAGAATATTTCTGGTCTTCGAATACGTACCAAATGGCACACTCAAGAGCTGGATCTCTGATGGCGATTCAACAAAATCCCTGAGTTGGACCCAACGCATAGGAGCTGCTATCGGAATAGCAAAGGGAATCCAATTTTTGCATACAGGGATTGTCCCTGGTGTATATTCAAACAATCTCAAGACAGAAGATGTTTTACTGGATCAGAATCTTGTTGCAAAAATCTGCAGCTATAACCTTCCTTTGTTATCTAACATGGGAAAGGTCCGGCATGGAAGTTCTTCCAGTGGATCAAAAAATTCTAGCATTAACAAAGATAAGTCTGATAGATACGACTTTGGAGTGATGCTACTGGAACTCATTCTAGGAAGGACAATAAGGTCAAGCAAGGATGCAGACGCTTTTAAGGATCTGTTGCAAGCAACTGTAGTAGCTGACAATGAAGCTCGTAGAAGCATTACCGATCCAATGATTCGCAAGGAATGCTTGGATCAATCATTGAAGACAATGATGGAAATTTGTGTGAGGTGCCTGGCTAAAGAGCCAGCAGATAGGCCCTCCATAGAAGATGTCTTGTGGAATTTGCAGTTTGCTGCTCAAGTACAGGATGCATGGAGAGGAGATTCCCAAAGCAGTGAGGGGTCACCTGGCTCCCCTTTTGAACCTAGAAGACTGCCTTTCCATTAG 2325 0.4202 MANKTHPSVFLVLVSILLCVCHSEQRQSSRTLTLLRIQQLLDFPVALSSWNSHTDFCRTESNSSLTVVCYEGNITQLHIIGDRRAPLPKNFSMDSFVKTLARLPSLKVLTLASLGMWGPLPAKIAGLPSLEIVNVSSNFLYGSIPHELSSLSNLQTLILDNNMFSSRLPDWLDSLPALTVLSLKNNLFNGTLPNSLGSLENLRILSLSHNHFFGLVPDLTLLTNLQVLELDDNAFGPQFPRLGNKLVTLVLRNNKFRSGIPAELISYYQLDRLDISSNKFVGPFQPALLSLPSITYLNISGNRLTGKLLENLSCNSELEAVDLSSNLLTGSLPKCLMSNSSGRTMLYARNCLETTNQNQQPAPFCHTEALAVGILPERKKHKQVSKVVLSLGIVGGTLGGVALVLLIFFVIRRGNAKSKMKNPPTRFISENAASGYTSKLLSEARYISQTKKLGAVGLPSYRSFSLEEIDAATNYFDTASLMGEDSQWEGQLKNGSLVAIRCVKMKKSYSTQNFTHHIELISKLRHRHLVSALGHCFECSLDDSSVSRIFLVFEYVPNGTLKSWISDGDSTKSLSWTQRIGAAIGIAKGIQFLHTGIVPGVYSNNLKTEDVLLDQNLVAKICSYNLPLLSNMGKVRHGSSSSGSKNSSINKDKSDRYDFGVMLLELILGRTIRSSKDADAFKDLLQATVVADNEARRSITDPMIRKECLDQSLKTMMEICVRCLAKEPADRPSIEDVLWNLQFAAQVQDAWRGDSQSSEGSPGSPFEPRRLPFH* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2002 774 MobiDBLite consensus disorder prediction 751 774 - -
Dod01g2002 774 Pfam Leucine rich repeat 152 212 IPR001611 GO:0005515
Dod01g2002 774 SUPERFAMILY L domain-like 30 352 - -
Dod01g2002 774 Gene3D Transferase(Phosphotransferase) domain 1 556 758 - -
Dod01g2002 774 Pfam Protein tyrosine and serine/threonine kinase 493 738 IPR001245 GO:0004672|GO:0006468
Dod01g2002 774 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 6 762 - -
Dod01g2002 774 Gene3D Ribonuclease Inhibitor 20 241 IPR032675 -
Dod01g2002 774 SUPERFAMILY Protein kinase-like (PK-like) 459 743 IPR011009 -
Dod01g2002 774 Gene3D Ribonuclease Inhibitor 242 361 IPR032675 -
Dod01g2002 774 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 6 762 - -
Dod01g2002 774 Gene3D Phosphorylase Kinase; domain 1 451 555 - -
Dod01g2002 774 ProSiteProfiles Leucine-rich repeat profile. 201 223 IPR001611 GO:0005515
Dod01g2002 774 ProSiteProfiles Protein kinase domain profile. 447 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2002 Dod-Chr1 55776780 55781004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2002 43 762 Miscellaneous Gene Families AT3G03770 63.064 0.0 880
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Dod01g2002 PK_Tyr_Ser-Thr 1.3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2002 - - gmx:100807539 1191.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2002 01 55776780 55781004 Dod01g2002 01 55776780 55781004 ECH