Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1993 ATGGATAGGCTCATAAGACTAGACCCATCAAACACAGTCCAAATAAGGGTTGAACAAGGTCAAAAATGTTATGGCCAGGTGACCTTGCGCAATGTTATGTATACCATGCCAGTGGCATTCAGGCTTCAGCCACTGATCAAGACACGTTACACAGTGAAGCCTCAATCAGGGATCATATCTCCTTTGGCCACAGTCACAGTGGAGATAGTTTACCATCTCCCCCAGGGGTCTTCTCTCCCACATTCTTTCCCTCACTCAGAGGACACTTTCCTCCTCCACAGTGTTGTTGTTCCTGGTGCAGCAACAAAGGAACCTTCCTCAATGTTTGATGCTGTCCCCAGTGACTGGTTCACCACAAAGAAGAAGCAGGTCTTCATCGACAGTGGCATCAGGATCATGTTTGTAGGGTCCCCAATTCTTGCTCAGCTTGTTGCAAATGGTTCCATGGATGACATAAGGGAAGTGTTGGAAAGAAGTGACCCTTCATGGAAAGCTGTTAATTCAGTAGATCCAAATGGCCACACACTGCTCCATTTGGCTATTTCACAAGGAAGACCAGACCTTGTTCAGTTGCTTCTAGAATTTGAGCCAGACATTGAGCTGCAGAACGGTTCTGGCTCAACACCACTTGAATCAGCATCATCCTCAGGAGAGGCCTTAATAGCTGAGCTTCTATTAGCACACAAGGCCACCACAGAGAGATCGGAATCATCCACATGGGGACCAATCCACCTTGCTGCAAAACAAGGACACTTGGAGGTTCTGAGGCTGTTGTTACTCAAAGGTGCCAAAGTTGACTCACCCACAAAAGATGGAAACACAGCATTGCACATTGCTGTTGAAGAACACAGAAGAGATTGTGCCAAACTCTTACTAGCAAACAATGCCAGAACAGATGTTAGAAACACAAGGGACGGCGACACCCCTCTACACTTAGCAGCATATATAGGTGATGAGAATATGGTCAAGCTCTTGCTCCAGAAGGGTGCAAACAAAGATGTTAGAAACAATTCAGGTAAAACTGCATATGATGTTGCAGCAGAGAATGGACACATGTGCATCTTCGATGCGTTGAGGTTTGGCGACAGTTTATGTGCCGCAGCGAGGAAAGGAGAGGTGAGGGCGATTCAAAGGTTGCTTGAGAATGGTGCTGTGATCAATGGGAGGGACCAAAATGGGTGGACGGCTCTGCATAGGGCGTGTTTCAAAGGGAGGATCGATGCGGTTCGCGCGTTGTTGGAGAAAGGAATTGATGTGGATGCCAAAGATGAAGATGGCTACACTGCTTTGCATTGTGCTGTTGAGTCTGGTCATGCTGATGTAACTGAGGTTTTGGTGAAGAAAGGTGCTGATGTTGAGGCTAGGACTAATAAGGGTGTCACTGCTTTGCAGGTTGCTGAGTCATTGCATTATGTTGGGATCACAAGGATACTTGTAAGTGGTGGGGCTTGTAGGGATGGTGTGGATCATTTGGTGGAGGCAGAATCTGGTGGGGTGGATCCATTTGGAAGTAAAATGGAAGCTATGAAGCTAAAGAATAAGAAGAAGTTTGGTAAAAGAAGAGAGGGCAGGGGTAGCTTTGATCGAGGTTCAAAGGCTTTGGCTGTGCTCTAG 1614 0.4684 MDRLIRLDPSNTVQIRVEQGQKCYGQVTLRNVMYTMPVAFRLQPLIKTRYTVKPQSGIISPLATVTVEIVYHLPQGSSLPHSFPHSEDTFLLHSVVVPGAATKEPSSMFDAVPSDWFTTKKKQVFIDSGIRIMFVGSPILAQLVANGSMDDIREVLERSDPSWKAVNSVDPNGHTLLHLAISQGRPDLVQLLLEFEPDIELQNGSGSTPLESASSSGEALIAELLLAHKATTERSESSTWGPIHLAAKQGHLEVLRLLLLKGAKVDSPTKDGNTALHIAVEEHRRDCAKLLLANNARTDVRNTRDGDTPLHLAAYIGDENMVKLLLQKGANKDVRNNSGKTAYDVAAENGHMCIFDALRFGDSLCAAARKGEVRAIQRLLENGAVINGRDQNGWTALHRACFKGRIDAVRALLEKGIDVDAKDEDGYTALHCAVESGHADVTEVLVKKGADVEARTNKGVTALQVAESLHYVGITRILVSGGACRDGVDHLVEAESGGVDPFGSKMEAMKLKNKKKFGKRREGRGSFDRGSKALAVL* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1993 537 ProSiteProfiles Ankyrin repeat profile. 205 237 IPR002110 GO:0005515
Dod01g1993 537 ProSiteProfiles Major sperm protein (MSP) domain profile. 4 135 IPR000535 -
Dod01g1993 537 ProSiteProfiles Ankyrin repeat profile. 305 337 IPR002110 GO:0005515
Dod01g1993 537 ProSiteProfiles Ankyrin repeat profile. 271 303 IPR002110 GO:0005515
Dod01g1993 537 ProSiteProfiles Ankyrin repeat profile. 392 424 IPR002110 GO:0005515
Dod01g1993 537 Gene3D Immunoglobulins 1 134 IPR013783 -
Dod01g1993 537 SUPERFAMILY Ankyrin repeat 166 489 IPR036770 -
Dod01g1993 537 ProSiteProfiles Ankyrin repeat profile. 172 204 IPR002110 GO:0005515
Dod01g1993 537 Gene3D - 302 362 IPR036770 -
Dod01g1993 537 Gene3D - 137 301 IPR036770 -
Dod01g1993 537 ProSiteProfiles Ankyrin repeat region circular profile. 425 457 - -
Dod01g1993 537 ProSiteProfiles Ankyrin repeat region circular profile. 305 337 - -
Dod01g1993 537 Pfam MSP (Major sperm protein) domain 5 109 IPR000535 -
Dod01g1993 537 Gene3D - 430 495 IPR036770 -
Dod01g1993 537 ProSiteProfiles Ankyrin repeat profile. 238 270 IPR002110 GO:0005515
Dod01g1993 537 PANTHER ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 1-LIKE 1 537 - -
Dod01g1993 537 Pfam Ankyrin repeats (many copies) 363 413 IPR002110 GO:0005515
Dod01g1993 537 Pfam Ankyrin repeats (many copies) 240 292 IPR002110 GO:0005515
Dod01g1993 537 ProSiteProfiles Ankyrin repeat region circular profile. 392 424 - -
Dod01g1993 537 ProSiteProfiles Ankyrin repeat region circular profile. 238 266 - -
Dod01g1993 537 Pfam Ankyrin repeats (3 copies) 299 355 IPR002110 GO:0005515
Dod01g1993 537 Pfam Ankyrin repeats (3 copies) 146 230 IPR002110 GO:0005515
Dod01g1993 537 Gene3D - 363 429 IPR036770 -
Dod01g1993 537 Pfam Ankyrin repeat 425 457 IPR002110 GO:0005515
Dod01g1993 537 PRINTS Ankyrin repeat signature 306 321 IPR002110 GO:0005515
Dod01g1993 537 PRINTS Ankyrin repeat signature 441 455 IPR002110 GO:0005515
Dod01g1993 537 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED 1 537 - -
Dod01g1993 537 ProSiteProfiles Ankyrin repeat region circular profile. 271 302 - -
Dod01g1993 537 MobiDBLite consensus disorder prediction 513 537 - -
Dod01g1993 537 SUPERFAMILY PapD-like 2 150 IPR008962 -
Dod01g1993 537 ProSiteProfiles Ankyrin repeat region circular profile. 172 203 - -
Dod01g1993 537 SMART ANK_2a 305 334 IPR002110 GO:0005515
Dod01g1993 537 SMART ANK_2a 205 234 IPR002110 GO:0005515
Dod01g1993 537 SMART ANK_2a 271 300 IPR002110 GO:0005515
Dod01g1993 537 SMART ANK_2a 359 388 IPR002110 GO:0005515
Dod01g1993 537 SMART ANK_2a 172 201 IPR002110 GO:0005515
Dod01g1993 537 SMART ANK_2a 392 421 IPR002110 GO:0005515
Dod01g1993 537 SMART ANK_2a 425 454 IPR002110 GO:0005515
Dod01g1993 537 SMART ANK_2a 238 267 IPR002110 GO:0005515
Dod01g1993 537 ProSiteProfiles Ankyrin repeat profile. 425 457 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1993 Dod-Chr1 55640225 55641838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1993 229 480 Miscellaneous Gene Families AT2G31820 30.903 2.38e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1993 - - jre:108997887 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1993 01 55640225 55641838 Dod01g1993 01 55640225 55641838 ECH
Dod01g1993 01 55640225 55641838 Dod02g2072 02 39435129 39436847 PCT