Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1981 ATGAGTCCACACCAGCCTCAAACATTCTCATTGTCCCACTGTGATCAATTAAAGCTCCCAAACCATGGATCTCAGCTTTATGTGTACAGCAACACCCGCAAAGGTGACACCAATTCATCACCATCATCATCATTCAAGTCTTCAGTGGACACTCTCAGAACCTCTCTCAGCAAAGCACTGAACTACTACTACCCTTTGGCTGGTAGATTGTGCTGGATCCAAGGTGGTAGATTGGAACTACTTTGCAACTCCAAGGGTGTGACACTCTTGGAAGCCACGTGTCCTGAGTCTAGTTTGGATGGGTTTGGTAACTTTGTTCTTCCACCCCATGTTGTGGAACAACTTGTGCCAAAGATTGACTATGGTTCTGTCCATATTGAGGACATGCCCTTGATGGTGGCACAAGTGACAAGGTTCTCTTGTGGTGGCATCACTCTAGGAGCCATCATTTGCCGTGCTGTGGTTGATGGAGCCTCTCTTGGGAACTTCATGAGCTCATGGGCTAAATTGGCAAGAGGGGAGAGCTTAGATTCTAGCTTGGTGCCACTGCTTGATAGAACAGTGTTGGATTCATTAGGCATGCACGTTGCACCAAGATTTGAACATGCTGAGTTTTTGCCACCACCCCTTTGGGGAGGTAGATTGGAGCAAGGACAACAAACCCAGATGAAGGATCTCGCTACTGCCACAATGAGACTCAGCAAAGGCCAAGTTGAGAAACTTAAGAAGAAAGCCAATGGATTTGGCAATGGATCAAAGGTATCAAACTTTGCACTTGCTCCAACGAGACCTTATACTAGTTTTGAGGTCATAGGTGGTCACTTGTGGAGGTGTTTTTGCAAGGTGAGGTTTGAGGGTAATGGGGGCCAGCCAACAAGGTTAAATGCCTTGGTGAATTGCAGGAACCGATTGAGACCACCTCTCCCTCATGCTTACTTTGGGAATGCAACATTTCCTACAGTGACACCAACTTGTTCCTTTGATGATATTGTGCATAAGCCTTTGAATTATGCAGTTGGGAATGTCAGGGAAGCAATTGAGAGGATGAGTGATGAGTATGTAAGGTCTGCTATTGACTATATTGCTAATCAGAAGGACATGAATTTGTTAAGGGATAAGTTGTACAACCCTGGAGGAAGACAATTCAAGGTGACCCCAAATTTGTATCTTGTGAGTTGGACTAATTTCCCATTTTATGCCACAGATTTTGGGTGGGGAAAACCTGATTATATGGTTCCAGGAAGCATAAATTCTGATGGGAAGGCTTTCCTTATGAACAATGGAAGTGGTGATGGCTTCATTGTGGCCATTTGTTTGCAGGCATCCGAGATAGATGCTCTGAAGAAGTTGTTCTATGAGGATACAGAAGAGGTAATGCCTAGTTCTAGATTGTGA 1395 0.448 MSPHQPQTFSLSHCDQLKLPNHGSQLYVYSNTRKGDTNSSPSSSFKSSVDTLRTSLSKALNYYYPLAGRLCWIQGGRLELLCNSKGVTLLEATCPESSLDGFGNFVLPPHVVEQLVPKIDYGSVHIEDMPLMVAQVTRFSCGGITLGAIICRAVVDGASLGNFMSSWAKLARGESLDSSLVPLLDRTVLDSLGMHVAPRFEHAEFLPPPLWGGRLEQGQQTQMKDLATATMRLSKGQVEKLKKKANGFGNGSKVSNFALAPTRPYTSFEVIGGHLWRCFCKVRFEGNGGQPTRLNALVNCRNRLRPPLPHAYFGNATFPTVTPTCSFDDIVHKPLNYAVGNVREAIERMSDEYVRSAIDYIANQKDMNLLRDKLYNPGGRQFKVTPNLYLVSWTNFPFYATDFGWGKPDYMVPGSINSDGKAFLMNNGSGDGFIVAICLQASEIDALKKLFYEDTEEVMPSSRL* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1981 464 Pfam Transferase family 3 452 - -
Dod01g1981 464 Gene3D - 1 207 IPR023213 -
Dod01g1981 464 PANTHER SHIKIMATE O-HYDROXYCINNAMOYLTRANSFERASE-RELATED 7 456 - -
Dod01g1981 464 Gene3D - 214 453 IPR023213 -
Dod01g1981 464 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1981 Dod-Chr1 55448493 55449925 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1981 51 453 Monolignol Biosynthesis Gene Families AT5G48930 37.129 2.16e-77 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1981 K13065 - gmx:100819383 539.265